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Structure and Function of the Protein Kinase R

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Book cover Interferon: The 50th Anniversary

Part of the book series: Current Topics in Microbiology and Immunology ((CT MICROBIOLOGY,volume 316))

Abstract

The protein kinase R (PKR) is an intracellular sensor of stress, exemplified by viral infection. Double-stranded (ds) RNA produced during viral replication activates PKR, which in turn arrests protein synthesis by phosphorylating the α subunit of the translation initiation factor eIF2. As well as dsRNA, two additional ligands, PACT and heparin, directly activate the kinase. These mediate the response of PKR to additional indirect stimuli, including bacterial lipopolysaccharides, ceramide and polyanionic molecules. This responsiveness to multiple stimuli advocates a broader role for PKR as a signalling molecule for diverse physiological stresses. Appropriately, a number of other protein substrates have been reported for PKR. These substrates support additional roles for PKR in the regulation of transcription and signal transduction in infected cells, as well as uninfected but diseased tissues, such as in tumorigenesis and neurodegenerative diseases. Finally, PKR plays a role in normal cell differentiation in platelet-derived growth factor signalling and in osteoblast-mediated calcification.

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Abbreviations

AT:

Amino-terminal heparin-binding domain

CTD:

Carboxy-terminal heparin-binding domain

dsRNA:

Double-stranded RNA

FA:

Fanconi anaemia

FADD:

Fas-associated death domain

GCN2:

General control non-de-repressible 2

HCV:

Hepatitis C virus

HDV:

Hepatitis D virus

HIV:

Human immunodeficiency virus

HRI:

Heme-regulated inhibitor

IFN:

Interferon

IRF:

IFN regulatory factor

ISRE:

Interferon stimulatory response element

KCS:

Kinase conserved sequence element

LTR:

Long terminal repeat

MEF:

Mouse embryonic fibroblasts

NF-κB:

Nuclear factor κ B

NF90:

Nuclear factor 90

PDGF:

Platelet-derived growth factor

PERK:

PKR-like endoplasmic reticulum kinase

PKR:

Protein kinase R

RBD:

dsRNA-binding domain

RBMs:

dsRNA-binding motifs

S-HDAg:

Hepatitis D virus small delta antigen

siRNA:

Small interfering RNA

SPNR:

Spermatid perinuclear RNA-binding protein

TNFα:

Tumour necrosis factor α

TRAF:

TNF receptor-associated factor

TRBP:

TAR RNA-binding protein

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© 2007 Springer-Verlag Berlin Heidelberg

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Sadler, A.J., Williams, B. (2007). Structure and Function of the Protein Kinase R. In: Pitha, P.M. (eds) Interferon: The 50th Anniversary. Current Topics in Microbiology and Immunology, vol 316. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-71329-6_13

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