Skip to main content
Log in

Extensive chromosome aberrations inSpiroplasma citri strain BR3

  • Published:
Biochemical Genetics Aims and scope Submit manuscript

Abstract

Genetic variations in the plant pathogen,Spiroplasma citri strain BR3, were characterized through physical genome mapping of the original isolate, BR3-3X, and two derivatives, BR3-T and BR3-G, obtained after several years of different maintenance conditions. BR3-T was transmitted from plant to plant via its natural insect vector, the leafhopperCirculifer tenellus, while BR3-G was maintained only in plants by periodic grafting and has lost its ability to be insect transmitted. By pulsed field gel electrophoresis (PFGE) analysis and DNA hybridization, extensive changes in chromosomal DNA restriction patterns relative to the parent, BR3-3X, were observed in both BR3-T and BR3-G, each of which also had a larger genome size than the parent line. Genetic organization was relatively conserved between BR3-T and BR3-3X. In contrast, a large chromosomal inversion and deletions of approximately 10 kb near each of the inversion borders were observed in BR3-G. One of the deletions, which included several possibly functional genes, was closely linked to a SpV1-related transposase gene. The locations of the deletion borders were also determined. The results of this study demonstrated remarkable genome instability of spiroplasmas.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Similar content being viewed by others

References

  • Altschul, S. F., Gish, W., Miller, W., Myers, E. W., and Lipman, D. J. (1990). Basic local alignment search tool.J. Mol. Biol. 215403.

    Article  PubMed  CAS  Google Scholar 

  • Carle, P., Laigret, F., Tully, J. G., and Bove, J. M. (1995). Heterogeneity of genome sizes within the genusSpiroplasma.Int. J. Syst. Bacteriol. 45187.

    Google Scholar 

  • Chevalier, C., Saillard, C., and Bove, J. M. (1990). Organization and nucleotide sequences of theSpiroplasma citri genes for ribosomal protein S2, elongation factor Ts, spiralin, phosphofructokinase, pyruvate kinase, and an unidentified protein.J. Bacteriol. 1722693.

    PubMed  CAS  Google Scholar 

  • Christiansen, G., Andersen, H., Birkelund, S., and Freundt, E. A. (1987). Genomic and gene variation inMycoplasma hominis strains.Isr. J. Med. Sci. 113595.

    Google Scholar 

  • Citti, C. (1992).Contribution a l'etude de l'organization du genome de Spiroplasma citri: Caracterisation de deux tRNAs trp chez S. citri et des genes correspondants, organization de genes de tRNAs et identification des genes, pyrG, purA et purB Ph.D. thesis, University II, Bordeaux, France.

    Google Scholar 

  • Davis, R. E. (1979). Spiroplasmas: Helical cell wall-free prokaryotes in diverse habitats. InProc. ROC-US Crop. Sci. Semin. Mycoplasma Dis. Plants Natl. Sci. Council, Taiwan, ROC, pp. 59–64.

    Google Scholar 

  • Fletcher, J., Shaw, M. E., Baker, G. R., Dugan, K. J., Ye, F., Sha, Y. H., Zuck, P., and Myers, G. D. (1996). Protein and DNA profiles ofSpiroplasma citri BR3 lines which differ in transmissibility by the leafhopperCirculifer tenellus.Can. J. Microbiol. 42124.

    Article  CAS  Google Scholar 

  • Fletcher, J., Schultz, G. A., Davis, R. E., Eastman, C. E., and Goodman, R. M. (1981). Brittle root disease of horseradish: Evidence for an etiological role ofSpiroplasma citri.Phytopathology 711073.

    Article  Google Scholar 

  • Laigret, F., Grau, O., and Bove, J. M. (1990). Comparison of 16S rDNA sequences of various mollicutes. InRecent Advances in Mycoplasmology, Zbl. Bakt. Sup. Gustav Fisher Verlag, Stuttgart/New York, Vol.20, pp. 435–440.

    Google Scholar 

  • Marck, C. (1988). “DNA strider”: A “C” program for the fast analysis of DNA and protein sequences on the Apple Macintosh family of computers.Nucleic Acids Res. 161829.

    PubMed  CAS  Google Scholar 

  • Pyle, L. E., and Finch, L. R. (1988). A physical map of the genome ofMycoplasma mycoides subspecies mycoides Y with some functional loci.Nucleic Acids Res. 166027.

    PubMed  CAS  Google Scholar 

  • Raju, K., and Smith, G. R. (1988).Genetic Recombination American Society for Microbiology, Washington, DC.

    Google Scholar 

  • Razin, S. (1989). Molecular approach to mycoplasma phylogeny.In Whitcomb, R. F., and Tully, J. G. (eds.),The Mycoplasmas, Vol. V Academic Press, New York, pp. 38–69.

    Google Scholar 

  • Renaudin, J., Aullo, P., Vignault, J. C., and Bove, J. M. (1990). Complete nucleotide sequence of the genome ofSpiroplasma citri virus SpV1-R8A2.Nucleic Acids Res. 181293.

    PubMed  CAS  Google Scholar 

  • Renaudin, J., and Bove, J. M. (1994). SpV1 and SpV4, spiroplasma viruses with circular, single-stranded DNA genomes, and their contribution to the molecular biology of spiroplasmas.Adv. Virus Res. 44429.

    Article  PubMed  CAS  Google Scholar 

  • Sanger, F., Nicklen, S., and Coulson, A. R. (1977). DNA sequencing with chain-terminating inhibitors.Proc. Natl. Acad. Sci. USA 745463.

    PubMed  CAS  Google Scholar 

  • Sturrock, S. S., and Collins, J. F. (1993).MPsrch Version 1.5 Biocomputing Research Unit, University of Edinburgh, UK.

    Google Scholar 

  • Wayadande, A. C., Shaw, M. E., and Fletcher, J. (1993). Tests of differential transmission of threeSpiroplasma citri lines by the leafhopper,Circulifer tenellus.Phytopathology 83468.

    Google Scholar 

  • Ye, F., Laigret, F., Whiteley, J., Citti, C., Finch, L., Carle, P., Renaudin, J., and Bove, J. M. (1992). A physical and genetic map of theSpiroplasma citri genome.Nucleic Acids Res. 201559.

    PubMed  CAS  Google Scholar 

  • Ye, F., Laigret, F., and Bove, J. M. (1994a). A physical and genomic map of the prokaryoteSpiroplasma melliferum and its comparison with theSpiroplasma citri map.C.R. Acad. Sci. Paris 317392.

    CAS  Google Scholar 

  • Ye, F., Renaudin, J., Bove, J. M., and Laigret, F. (1994b). Cloning and sequencing of the replication origin (oriC) of theSpiroplasma citri chromosome and construction of autonomously replicating artificial plasmids.Curr. Microbiol. 2923.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Ye, F., Melcher, U., Rascoe, J.E. et al. Extensive chromosome aberrations inSpiroplasma citri strain BR3. Biochem Genet 34, 269–286 (1996). https://doi.org/10.1007/BF02399947

Download citation

  • Received:

  • Revised:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF02399947

Key words

Navigation