Skip to main content
Log in

Alternative splicing in the dyslexia-associated gene KIAA0319

  • Published:
Mammalian Genome Aims and scope Submit manuscript

Abstract

The KIAA0319 gene in chromosome 6p22 has been strongly associated with developmental dyslexia. In this article we show a wide expression pattern of this gene in human adult brain by Northern blot analysis. We also performed RT-PCR analysis to detect alternative splicing variants in human brain. Most of the detected variants involve alternative splicing of the exons at the 5′ and the 3′ ends. Two main forms differing in the length of the 5′ UTR are detected at approximately the same rate. Two variants (B and C) lacking exon 19, which encodes the transmembrane domain, are the main alternative forms detected among those predicted to encode protein. These two variants could be secreted and might be involved in signaling functions. A similar RT-PCR analysis performed in mouse and rat adult brains showed that only some of the alternative splicing variants are equivalent to those found in the human gene.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Similar content being viewed by others

References

  • Cope N, Harold D, Hill G, Moskvina V, Stevenson J, et al. (2005) Strong evidence that KIAA0319 on chromosome 6p is a susceptibility gene for developmental dyslexia. Am J Hum Genet 76:581–591

    Article  PubMed  CAS  Google Scholar 

  • Fisher SE, Francks C (2006) Genes, cognition and dyslexia: learning to read the genome. Trends Cogn Sci 10:250–257

    Article  PubMed  Google Scholar 

  • Francks C, Paracchini S, Smith SD, Richardson AJ, Scerri TS, et al. (2004) A 77-kilobase region of chromosome 6p22.2 is associated with dyslexia in families from the United Kingdom and from the United States. Am J Hum Genet 75:1046–1058

    Article  PubMed  CAS  Google Scholar 

  • Galaburda AM, LoTurco J, Ramus F, Fitch RH, Rosen GD (2006) From genes to behavior in developmental dyslexia. Nat Neurosci 9:1213–1217

    Article  PubMed  CAS  Google Scholar 

  • Ghashghaei HT, Lai C, Anton ES (2007) Neuronal migration in the adult brain: are we there yet? Nat Rev Neurosci 8:141–151

    Article  PubMed  CAS  Google Scholar 

  • Guo J, Chen S, Huang C, Chen L, Studholme DJ, et al. (2004) MANSC: a seven-cysteine-containing domain present in animal membrane and extracellular proteins. Trends Biochem Sci 29:172–174

    Article  PubMed  CAS  Google Scholar 

  • Habib M (2000) The neurological basis of developmental dyslexia: an overview and working hypothesis. Brain 123 Pt 12:2373–2399

    Google Scholar 

  • Harold D, Paracchini S, Scerri T, Dennis M, Cope N, et al. (2006) Further evidence that the KIAA0319 gene confers susceptibility to developmental dyslexia. Mol Psychiatry 11:1085–1091

    Article  PubMed  CAS  Google Scholar 

  • Hughes TA (2006) Regulation of gene expression by alternative untranslated regions. Trends Genet 22:119–122

    Article  PubMed  CAS  Google Scholar 

  • Ibraghimov-Beskrovnaya O, Bukanov NO, Donohue LC, Dackowski WR, Klinger KW, et al. (2000) Strong homophilic interactions of the Ig-like domains of polycystin-1, the protein product of an autosomal dominant polycystic kidney disease gene, PKD1. Hum Mol Genet 9:1641–1649

    Article  PubMed  CAS  Google Scholar 

  • Lejeune F, Maquat LE (2005) Mechanistic links between nonsense-mediated mRNA decay and pre-mRNA splicing in mammalian cells. Curr Opin Cell Biol 17:309–315

    Article  PubMed  CAS  Google Scholar 

  • Londin ER, Meng H, Gruen JR (2003) A transcription map of the 6p22.3 reading disability locus identifying candidate genes. BMC Genomics 4:25

    Article  PubMed  Google Scholar 

  • McGrath LM, Smith SD, Pennington BF (2006) Breakthroughs in the search for dyslexia candidate genes. Trends Mol Med 12:333–341

    Article  PubMed  CAS  Google Scholar 

  • Mignone F, Gissi C, Liuni S, Pesole G (2002) Untranslated regions of mRNAs. Genome Biol 3, reviews0004

  • Ming GL, Song H (2005) Adult neurogenesis in the mammalian central nervous system. Annu Rev Neurosci 28:223–250

    Article  PubMed  CAS  Google Scholar 

  • Paracchini S, Thomas A, Castro S, Lai C, Paramasivam M, et al. (2006) The chromosome 6p22 haplotype associated with dyslexia reduces the expression of KIAA0319, a novel gene involved in neuronal migration. Hum Mol Genet 15:1659–1666

    Article  PubMed  CAS  Google Scholar 

  • Stamm S, Ben-Ari S, Rafalska I, Tang Y, Zhang Z, et al. (2005) Function of alternative splicing. Gene 344:1–20

    Article  PubMed  CAS  Google Scholar 

  • Wagner E, Lykke-Andersen J (2002) mRNA surveillance: the perfect persist. J Cell Sci 115:3033–3038

    PubMed  CAS  Google Scholar 

  • Williams J, O’Donovan MC (2006) The genetics of developmental dyslexia. Eur J Hum Genet 14:681–689

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgments

This work was supported by the Wellcome Trust. APM is a Wellcome Trust Principal Research Fellow.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Anthony P. Monaco.

Electronic supplementary material

Rights and permissions

Reprints and permissions

About this article

Cite this article

Velayos-Baeza, A., Toma, C., da Roza, S. et al. Alternative splicing in the dyslexia-associated gene KIAA0319 . Mamm Genome 18, 627–634 (2007). https://doi.org/10.1007/s00335-007-9051-3

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00335-007-9051-3

Keywords

Navigation