Skip to main content
Log in

Characterization of an Arabidopsis thaliana mutant lacking a cytosolic non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase

  • Published:
Plant Molecular Biology Aims and scope Submit manuscript

Abstract

Non-phosphorylating glyceraldehyde- 3-phosphate dehydrogenase (NP-GAPDH) is a conserved cytosolic protein found in higher plants. In photosynthetic cells, the enzyme is involved in a shuttle transfer mechanism to export NADPH from the chloroplast to the cytosol. To investigate the role of this enzyme in plant tissues, we characterized a mutant from Arabidopsis thaliana having an insertion at the NP-GAPDH gene locus. The homozygous mutant was determined to be null respect to NP-GAPDH, as it exhibited undetectable levels of both transcription of NP-GAPDH mRNA, protein expression and enzyme activity. Transcriptome analysis demonstrated that the insertion mutant plant shows altered expression of several enzymes involved in carbohydrate metabolism. Significantly, cytosolic phosphorylating (NAD-dependent) glyceraldehyde-3-phosphate dehydrogenase mRNA levels are induced in the mutant, which correlates with an increase in enzyme activity. mRNA levels and enzymatic activity of glucose-6-phosphate dehydrogenase were also elevated, correlating with an increase in NADPH concentration. Moreover, increased ROS levels were measured in the mutant plants. Down-regulation of several glycolytic and photosynthetic genes suggests that NP-GAPDH is important for the efficiency of both metabolic processes. The results presented demonstrate that NP-GAPDH has a relevant role in plant growth and development.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Arnon DI, Rosenberg LL, Whatley FR (1954). A new glyceraldehyde phosphate dehydrogenase from photosynthetic tissues. Nature 173:1132–1134

    Article  CAS  Google Scholar 

  • Arutyunov DY, Muronetz VI (2003) The activation of glycolysis performed by the nonphosphorylating glyceraldehyde- 3-phosphate dehydrogenase in the model system. Biochem Biophys Res Común 300:149–154

    Article  CAS  Google Scholar 

  • Beyer WF Jr, Fridovich I (1987) Assaying for superoxide dismutase activity: some large consequences of minor changes in conditions. Anal Biochem 161:559–566

    Article  PubMed  CAS  Google Scholar 

  • Bollag DM, Edelstein SJ (1991) Protein concentration determination. In: Bollag DM, Edelstein SJ (eds). Protein methods. Wiley-Liss, New York, pp 50–55

    Google Scholar 

  • Bolstad BM, Irizarry RA, Astrand M, Speed TP (2003) A comparison of normalization methods for high density oligonucleotide array data based on bias and variance. Bioinformatics 19:185–193

    Article  PubMed  CAS  Google Scholar 

  • Bustos DM, Iglesias AA (2002) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase is post-translationally phosphorylated in heterotrophic cells of wheat (Triticum aestivum). FEBS Lett 530:169–173

    Article  PubMed  CAS  Google Scholar 

  • Bustos DM, Iglesias AA (2003) Phosphorylated non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase from heterotrophic cells of wheat interacts with 14-3-3 proteins. Plant Physiol 133:2081–2088

    Article  PubMed  CAS  Google Scholar 

  • Cerff R (1995) Origin and evolution of phosphorylating and non-phosphorylating glyceraldehydes-3-phosphate dehydrogenase. In: Mathis P (ed) Photosynthesis: from light to biosphere. Kluwer Academic Publishers, Dordrecht, 1:933–938

  • Eastmond PJ, Germain V, Lange PR, Bryce JH, Smith SM, Graham IA (2000) Postgerminative growth and lipid catabolism in oilseeds lacking the glyoxylate cycle Proc Natl Acad Sci USA 97:5669–5674

    Article  PubMed  CAS  Google Scholar 

  • Fernie AR, Carrari F, Sweetlove LJ (2004) Respiratory metabolism: Glycolysis, the TCA cycle and mitochondrial electron transport. Curr Opin Plant Biol 7:254–261

    Article  PubMed  CAS  Google Scholar 

  • Fernie AR, Tauberger E, Lytovchenko A, Roessner U, Willmitzer L, Trethewey RN (2002) Antisense repression of cytosolic phosphoglucomutase in potato (Solanum tuberosum) results in severe growth retardation, reduction in tuber number and altered carbon metabolism. Planta 214:510–520

    Article  PubMed  CAS  Google Scholar 

  • Filosa S, Fico A, Paglialunga F, Balestrieri M, Crooke A, Verde P, Abrescia P, Bautista JM, Martini G (2003) Failure to increase glucose consumption through the pentose-phosphate pathway results in the death of glucose-6-phosphate dehydrogenase gene-deleted mouse embryonic stem cells subjected to oxidative stress. Biochem J 370:935–943

    Article  PubMed  CAS  Google Scholar 

  • Flohe L, Otting F (1984) Superoxide dismutase assays. Methods Enzymol 105:93–104

    PubMed  CAS  Google Scholar 

  • Giegé P, Heazlewood JL, Roessner-Tunali U, Millar AH, Fernie AR, Leaver CJ, Sweetlove LJ (2003) Enzymes of glycolysis are functionally associated with the mitochondrion in Arabidopsis cells. Plant Cell 15:2140–2151

    Article  PubMed  CAS  Google Scholar 

  • Gómez-Casati DF, Sesma JI, Iglesias AA (2000) Structural and kinetic characterization of NADP-dependent, non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase from celery leaves. Plant Sci 154:107–115

    Article  PubMed  Google Scholar 

  • Goncalves MC, Vega J, Oliveira JG (2005) Sugarcane yellow leaf virus infection leads to alterations in photosynthetic efficiency and carbohydrate accumulation in sugarcane leaves. Fitopatol Bras 30:10–16

    Google Scholar 

  • Habenicht A (1997) The non-phosphorylating glyceraldehydes-3-phosphate dehydrogenase: Biochemistry, structure, occurrence and evolution. Biol Chem 378:1413–1419

    PubMed  CAS  Google Scholar 

  • Hauschild R, von Schaewen A (2003) Differential regulation of glucose-6-phosphate dehydrogenase isoenzyme activities in potato. Plant Physiol 133:47–62

    Article  PubMed  CAS  Google Scholar 

  • Hempel SL, Buettner GR, O’Malley YQ (1999) Dihydrofluorescein diacetate is superior for detecting intracellular oxidants: Comparison with 2′,7′ dichloro dihydro fluorescein diacetate, 5 (and 6)-carboxy-2′,7′-dichlorodihydrofluorescein diacetate, and dihydrorhodamine 123. Free Radic Biol Med 27:146–159

    Article  PubMed  CAS  Google Scholar 

  • Igamberdiev AU, Hurry V, Krömer S, Gardeström P (1998) The role of mitochondrial electron transport during photosynthetic induction. A study with barley (Hordeum vulgare) protoplasts incubated with rotenone and oligomycin. Physiol Plantarum 104:431–439

    Article  CAS  Google Scholar 

  • Iglesias AA, Serrano A, Guerrero MG, Losada M (1987) Purification and properties of NADP-dependent glyceraldehydes-3-phosphate dehydrogenase from green alga Chlamydomonas reinhardtii. Biochim Biophys Acta 925:1–10

    CAS  Google Scholar 

  • Inskeep WP, Bloom PR (1985) Extinction coefficients of Chlorophyll a and b in N,N-Dimethylformamide and 80% acetone. Plant Physiol 77:483–485

    PubMed  CAS  Google Scholar 

  • Jakubowski W, Bartosz G (2000) 2,7-dichlorofluorescin oxidation and reactive oxygen species: What does it measure? Cell Biol Int 10:757–760

    Article  CAS  Google Scholar 

  • Kelly GJ, Gibbs M (1973) Non-reversible d-glyceraldehyde 3-phosphate dehydrogenase of plant tissues. Plant Physiol 52:111–118

    PubMed  CAS  Google Scholar 

  • Kim KJ, Park CJ, An JM, Ham BK, Lee BJ, Paek KH (2005) CaAlaAT1 catalyzes the alanine: 2-oxoglutarate aminotransferase reaction during the resistance response against Tobacco mosaic virus in hot pepper. Planta 221:857–867

    Article  PubMed  CAS  Google Scholar 

  • Laloi C, Mestres-Ortega D, Marco Y, Meyer Y, Reichheld J (2004) The Arabidopsis cytosolic Thioredoxin h5 gene induction by oxidative stress and its W-box-mediated response to pathogen elicitor1. Plant Physiol 134:1006–1016

    Article  PubMed  CAS  Google Scholar 

  • Millar AH, Considine MJ, Day DA, Whelan J (2001) Unravelling the role of mitochondria during oxidative stress in plants. IUBMB Life 51:201–205

    Article  PubMed  CAS  Google Scholar 

  • Møller IM (2001) Plant mitochondria and oxidative stress: Electron transport, NADPH turnover, and metabolism of reactive oxygen species. Annu Rev Plant Physiol Plant Mol Biol 52:561–591

    Article  PubMed  Google Scholar 

  • Møller IM, Kristensen BK (2004) Protein oxidation in plant mitochondria as a stress indicator. Photochem Photobiol Sci 3:730–735

    Article  PubMed  CAS  Google Scholar 

  • Moran R (1982) Formulae for determination of chlorophyllous pigments extracted with N,N-dimethylformamide. Plant Physiol 69:1376–1381>

    PubMed  CAS  Google Scholar 

  • Oliveira CPMS, Kassab P, Lopasso FP, Souza HP, Janiszewski M, Laurindo FRM, Iriya K, Laudanna AA (2003) Protective effect of ascorbic acid in experimental gastric cancer: Reduction of oxidative stress. World J Gastroenterol 9:446–448

    PubMed  CAS  Google Scholar 

  • Plaxton WC (1989) Molecular and immunological characterization of plastid and cytosolic pyruvate kinase isozymes from castor oil endosperm and leaf. Eur J Biochem 181:443–451

    Article  PubMed  CAS  Google Scholar 

  • Plaxton WC (1996) The organization and regulation of plant glycolysis. Annu Rev Plant Physiol Plant Mol Biol 47:185–214

    Article  PubMed  CAS  Google Scholar 

  • Riganti C, Gazzano E, Polimeni M, Costamagna C, Bosia A, Ghigo D (2004) Diphenyleneiodonium inhibits the cell redox metabolism and induces oxidative stress. J Biol Chem 279:47726–47731

    Article  PubMed  CAS  Google Scholar 

  • Rosenberg LL, Arnon DI (1955) The preparation and properties of a new glycerladehyde-3-phosphate dehydrogenase from photosynthetic tissues. J Biol Chem 217:361–371

    PubMed  CAS  Google Scholar 

  • Rumpho ME, Edwards GE, Loescher WH (1983) A pathway for photosynthetic carbon flow to mannitol in celery leaves. Activity and localization of key enzymes. Plant Physiol 73:869–873

    Article  PubMed  CAS  Google Scholar 

  • Said TM, Aziz N, Sharma RK, Lewis-Jones I, Thomas AJ Jr, Agarwal A (2005) Novel association between sperm deformity index and oxidative stress-induced DNA damage in infertile male patients. Asian J Androl 7:121–126

    Article  PubMed  CAS  Google Scholar 

  • Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: A laboratory manual, 2nd edn. (Nolan C (ed)). Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY

  • Siddiquee KA, Arauzo-Bravo MJ, Shimizu K (2004) Effect of a pyruvate kinase (pykF-gene) knockout mutation on the control of gene expression and metabolic fluxes in Escherichia coli. FEMS Microbiol Lett 235:25–33

    Article  PubMed  CAS  Google Scholar 

  • Smirnoff N (1998) Plant resistance to environmental stress. Curr Opin Biotechnol 9:214–219

    Article  PubMed  CAS  Google Scholar 

  • Sweetlove LJ, Heazlewood JL, Herald V, Holtzapffel R, Day DA, Leaver CJ, Millar AH (2002) The impact of oxidative stress on Arabidopsis mitochondria. Plant J 32:891–904

    Article  PubMed  CAS  Google Scholar 

  • Tang GQ, Hardin SC, Dewey R, Huber SC (2003) A novel C-terminal proteolytic processing of cytosolic pyruvate kinase, its phosphorylation and degradation by the proteasome in developing soybean seeds. Plant J 34:77–93

    Article  PubMed  CAS  Google Scholar 

  • Trípodi KEJ, Podestá FE (2003) Purification and characterization of an NAD-dependent malate dehydrogenase from leaves of crassulacean acid metabolism plant Aptenia cordifolia. Plant Physiol Biochem 41:97–105

    Article  CAS  Google Scholar 

  • Tusher V, Tibshirani R, Chu G (2001) Significance analysis of microarrays applied to the ionizing radiation response. Proc Natl Acad Sci USA 98:5116–5121

    Article  PubMed  CAS  Google Scholar 

  • Wang RC, Okamoto M, Xing XJ, Crawford NM (2003) Microarray analysis of the nitrate response in Arabidopsis roots and shoots reveals over 1,000 rapidly responding genes and new linkages to glucose, trehalose-6-phosphate, iron, and sulfate metabolism. Plant Physiol 132:556–567

    Article  PubMed  CAS  Google Scholar 

  • Wasaki J, Yonetani R, Kuroda S, Shinano T, Yazaki J, Fujii F, Shimbo K, Yamamoto K, Sakata K, Sasaki T (2003) Transcriptomic analysis of metabolic changes by phosphorus stress in rice plant roots. Plant Cell Environ 26:1515–1523

    Article  CAS  Google Scholar 

  • Wu P, Ma L, Hou X, Wang M, Wu Y, Liu F, Wang Deng X (2003) Phosphate starvation triggers distinct alterations of genome expression in Arabidopsis roots and leaves. Plant Physiol 132:1260–1271

    Article  PubMed  CAS  Google Scholar 

  • Zhang Z, Yu J, Stanton R (2000) A method for determination of pyridine nucleotides using a single extract. Anal Biochem 285:163–167

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Alberto A. Iglesias.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Rius, S.P., Casati, P., Iglesias, A.A. et al. Characterization of an Arabidopsis thaliana mutant lacking a cytosolic non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase. Plant Mol Biol 61, 945–957 (2006). https://doi.org/10.1007/s11103-006-0060-5

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11103-006-0060-5

Keywords

Navigation