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High chromosome conservation detected by comparative chromosome painting in chicken, pigeon and passerine birds

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Abstract

Chicken chromosome paints for macrochromosomes 1-10, Z, and the nine largest microchromosomes (Griffin et al. 1999) were used to analyze chromosome homologies between chicken (Gallus gallus domesticus: Galliformes), domestic pigeon (Columba livia: Columbiformes), chaffinch (Fringilla coelebs: Passeriformes), and redwing (Turdus iliacus: Passeriformes). High conservation of syntenies was revealed. In general, both macro- and microchromosomes in these birds showed very low levels of interchromosomal rearrangements. Only two cases of rearrangements were found. Chicken chromosome 1 corresponds to chromosome 1 in pigeon, but to chromosomes 3 and 4 in chaffinch and chromosomes 2 and 5 in redwing. Chicken chromosome 4 was shown to be homologous to two pairs of chromosomes in the karyotypes of pigeon and both passerine species. Comparative analysis of chromosome painting data and the results of FISH with (TTAGGG)n probe did not reveal any correlation between the distribution of interstitial telomere sites (ITSs) and chromosome rearrangements in pigeon, chaffinch and redwing. In chaffinch, ITSs were found to co-localize with a tandem repeat GS (Liangouzov et al. 2002), monomers of which contain an internal TTAGGG motif.

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References

  • Alkalaeva EZ, Trifonov VA, Perelman PL, Graphodatsky AS (2002) Comparative chromosome painting.Rus J Genet 38: 869 -876.

    Article  CAS  Google Scholar 

  • Azzalin CM, Nergadze SG, Giulotto E (2001) Human intrachromosomal telomeric-like repeats:sequence organi-zation and mechanisms of origin.Chromosoma 110: 75 -82.

    PubMed  CAS  Google Scholar 

  • Chowdhary BP, Raudsepp T (2001) Chromosome painting in farm,pet and wild animal species.Methods Cell Sci 23: 37 -55.

    Article  PubMed  CAS  Google Scholar 

  • Christidis L (1983) Extensive chromosomal repatterning in two congeneric species:Pytilia melba,L.and Pytilia phoeni-coptera Swainson (Estrildidae;Aves).Cytogenet Cell Genet 36:641 -648.

    PubMed  CAS  Google Scholar 

  • Christidis L (1986a) Chromosomal evolution within the family Estrildidae (Aves)I.The Poephilae.Genetica 71:81 -97.

    Article  Google Scholar 

  • Christidis L (1986b) Chromosomal evolution within the family Estrildidae (Aves)II.The Lonchurae.Genetica 71: 99 -113.

    Article  Google Scholar 

  • Christidis L (1986c) Chromosomal evolution in nches and their allies (families:Ploceidae,Fringillidae,and Ember-izidae).Can J Genet Cytol 28:762 -769.

    Google Scholar 

  • Christidis L (1987) Chromosomal evolution within the family Estrildidae (Aves)III.The Estrildae (waxbill nches). Genetica 72:93 -100.

    Article  Google Scholar 

  • Christidis L (1990) Aves.In:John B,ed,Animal Cytogenetics. Vol.4:Chordata 3.Berlin: Gebrüder Borntraeger.

    Google Scholar 

  • Delany ME, Krupkin AB, Miller MM (2000)Organization of telomere sequences in birds:evidence for arrays of extreme length and for in vivo shortening.Cytogenet Cell Genet 90: 139 -145.

    Article  PubMed  CAS  Google Scholar 

  • Fanning TG (1987) Origin and evolution of a major feline satellite DNA.J Mol Biol 197:627 -634.

    Article  PubMed  CAS  Google Scholar 

  • Garagna S, Ronchetti E, Mascheretti S et al.(1997) Non-telomeric chromosome localization of (TTAGGG)n repeats in the genus Eulemur.Chromosome Res 5:487 -491.

    Article  PubMed  CAS  Google Scholar 

  • Garrido-Ramos MA, de la Herran R, Ruiz Rejon C, Ruiz Rejon M (1998) A satellite DNA of the Sparidae family (Pisces,Perciformes)associated with telomeric sequences. Cytogenet Cell Genet 83:3 -9.

    Article  PubMed  CAS  Google Scholar 

  • Griffin DK, Haberman F, Masabanda J et al.(1999) Micro-and macrochromosome paints generated by.ow cytometry and microdissection:tools for mapping the chicken genome. Cytogenet Cell Genet 87:278 -281.

    Article  PubMed  CAS  Google Scholar 

  • Grutzner F, Zeng-Ajusch E, Stout K (2001) Chicken microchromosomes are hypermethylated and can be identi ed by speci c painting probes.Cytogenet Cell Genet 93:265 -269.

    Article  PubMed  CAS  Google Scholar 

  • Guillier-Gencik Z, Bernheim A, Coullin P (1999) Generation of whole-chromosome painting probes speci c to each chicken macrochromosome.Cytogenet Cell Genet 87:282 -285.

    Article  PubMed  CAS  Google Scholar 

  • Guttenbach M, Nanda I, Feichtinger W, Masabanda JS, Griffin DK, Schmid M (2003) Comparative chromosome painting of chicken autosomal paints 1 -9 in nine different bird species.Cytogenet Genome Res 103:173 -184.

    CAS  Google Scholar 

  • Härlid A, Janke A, Arnason U (1998) The complete mito-chondrial genome of Rhea americana and early avian divergences.J Mol Evol 46:669 -679.

    Article  PubMed  Google Scholar 

  • Hartmann N, Scherthan H (2004) Characterization of ancestral chromosome fusion points in the Indian muntjac deer.Chromosoma 112:213 -220.

    Article  PubMed  CAS  Google Scholar 

  • Ijdo JW, Baldini A, Ward DC, Reeders ST, Wells RA (1991) Origin of human chromosome 2:an ancestral telomere - telomere fusion.Proc Natl Acad Sci USA 88:9051 -9055.

    Article  PubMed  CAS  Google Scholar 

  • Kasai F, Garcia C, Arruga MV, Ferguson-Smith MA (2003) Chromosome homology between chicken (Gallus gallus domesticus )and the red-legged partridge (Alectoris rufa); evidence of the occurrence of a neocentromere during evolution.Cytogenet Genome Res 102:326 -330.

    Article  PubMed  CAS  Google Scholar 

  • Lear TL (2001) Chromosomal distribution of the telomere sequence (TTAGGG)n in the Equidae.Cytogenet Cell Genet 93:127 -130.

    Article  PubMed  CAS  Google Scholar 

  • Li Y-C, Lee C, Sanoudou D, Hsu T-H, Li S-Y, Lin C-C (2000) Interstitial colocalization of two cervid satellite DNAs involved in the genesis of the Indian muntjac karyotype. Chromosome Res 8:363 -373.

    Article  PubMed  CAS  Google Scholar 

  • Liangouzov IA, Derjusheva SE, Sai tdinova AF, Malykh AG, Gaginskaya ER (2002) Monomers of a satellite DNA sequence of chaf nch (Fringilla coelebs L.,Aves:Passer-iformes)contains short clusters of the TTAGGG repeat.Rus J Genetics 38:1359 -1364.

    Article  CAS  Google Scholar 

  • Liu W-S, Fredga K (1999) Telomeric (TTAGGG)n sequences are associated with nucleolus organizer regions (NORs)in the wood lemming.Chromosome Res 7:235 -240.

    Article  PubMed  CAS  Google Scholar 

  • Masabanda JS, Burt DW, O'Brien PCM et al.(2004) Molecular cytogenetic de nition of the chicken genome:the rst complete avian karyotype.Genetics 166:1367 -1373.

    Article  PubMed  CAS  Google Scholar 

  • Meyne J, Baker RJ, Hobart HH et al.(1990) Distribution of non-telomeric sites of the (TTAGGG)n telomeric sequence in vertebrate chromosomes.Chromosoma 99:3 -10.

    Article  PubMed  CAS  Google Scholar 

  • Multani AS, Ozen M, Furlong CL, Zhao Y-J, Hsu TC

  • Pathak S (2001) Heterochromatin and interstitial telomeric DNA homology.Chromosoma 110:214 -220.

    PubMed  Google Scholar 

  • Nanda I, Schmid M (1994) Localization of the telomeric (TTAGGG)n sequence in chicken (Gallus domesticus ) chromosomes.Cytogenet Cell Genet 65:190 -193.

    Article  PubMed  CAS  Google Scholar 

  • Nanda I, Schrama D, Feichtinger W, Haaf T, Schartl M, Schmid M (2002) Distribution of telomeric (TTAGGG)n sequences in avian chromosomes.Chromosoma 111: 215 -227.

    PubMed  CAS  Google Scholar 

  • Nishida C, Sasaki M, Hori H (1981) Banding patterns and nucleolus organizing regions in somatic chromosomes of the Siberian great bustard Otis tarda,with a note on the karyotypic similarities to the crane.Chromosome Information Service 31:28 -30.

    Google Scholar 

  • Pagnozzi JM, de Jesus Silva MJ, Yonenaga-Yassuda Y (2000) Intraspeci c variation in the distribution of the interstitial telomeric (TTAGGG)n sequences in Microureus demerarae (Marsupialia:Didelphidae).Chromosome Res 8: 585 -591.

  • Pagnozzi JM, Ditchfield AD, Yonenaga-Yassuda Y (2002) Mapping the distribution of the interstitial telomeric (TTAGGG)n sequences in eight species of Brazilian marsupials (Didelphidae)by FISH and the correlation with constitutive heterochromatin.Do ITS represent evidence for fusion events in American marsupials?Cytogenet Genome Res 98:278 -284.

    Article  PubMed  CAS  Google Scholar 

  • Prychitko TM, Moore WS (2003) Alignment and phylogenetic analysis of b brinogen intron 7 sequences among avian orders reveal conserved regions within the intron.Mol Biol Evol 20:762 -771.

    Article  PubMed  CAS  Google Scholar 

  • Raudsepp T, Houck ML, Brien CO, Ferguson-Smith MA, Ryder OA, Chowdhary BP (2002) Cytogenetic analysis of California condor (Gymnogyps californianus )chromosomes: comparison with chicken (Gallus gallus )macrochromosomes. Cytogenet Genome Res 98:54 -60.

    Article  PubMed  CAS  Google Scholar 

  • Rodionov AV (1997) Evolution of avian chromosomes and linkage groups.Rus J Genet 33:605 -617.

    CAS  Google Scholar 

  • Salvadori S, Deiana A, Coluccia E, Floridia G, Rossi E, Zuffardi O (1995) Colocalization of (TTAGGG)n telomeric sequences and ribosomal genes in Atlantic eels.Chromosome Res 3:54 -58.

  • Sasaki M (1981) High resolution G-band karyotypes of the domestic fowl and the Japanese quail.Chromosome Information Service 31:26 -28.

    Google Scholar 

  • Schmid M, Nanda I, Guttenbach M et al.(2000) First report on chicken genes and chromosomes.Cytogenet Cell Genet 90:169 -218.

    Article  PubMed  CAS  Google Scholar 

  • Shetty S, Griffin DK, Graves JAM (1999) Comparative painting reveals strong chromosome homology over 80 million years of bird evolution.Chromosome Res 7: 289 -295.

  • Shibusawa M, Nishida-Umehara C, Masabanda J, Griffin DK, Isobe T, Matsuda Y (2002) Chromosome rearrangements between chicken and guinea fowl de ned by comparative chromosome painting and FISH mapping of DNA clones. Cytogenet Genome Res 98:225 -230.

    Article  PubMed  CAS  Google Scholar 

  • Solari AJ (1977) Ultrastructure of the synaptic autosomes and the ZW bivalent in chicken oocytes.Chromosoma 64: 155 -165.

    Article  Google Scholar 

  • Solovei I, Gaginskaya E, Hutchison N, Macgregor H (1993) Avian sex chromosomes in the lampbrush form:the ZW lampbrush bivalents from six species of bird.Chromosome Res 1:153 -166.

    Article  PubMed  CAS  Google Scholar 

  • Solovei I, Gaginskaya ER, Macgregor HC (1994) The arrangement and transcription of telomere DNA sequences at the ends of lampbrush chromosomes of birds.Chro-mosome Res 2:460 -470.

    Article  CAS  Google Scholar 

  • Stock AD, Mengden GA (1975) Chromosome banding pattern conservatism in birds and nonhomology of chromosome banding patterns between birds,turtles,snakes and amphibians.Chromosoma 50:69 -77.

    Article  PubMed  CAS  Google Scholar 

  • Telenius H, Pelmear AH, Tunnacliffe A et al.(1992) Cytogenetic analysis by chromosome painting using DOP-PCR ampli ed.ow-sorted chromosomes.Genes Chromo-somes Cancer 4:257 -263.

    CAS  Google Scholar 

  • van Tuinen M, Sibley CG, Hedges SB (2000) The early history of mordern birds inferred from DNA sequences of nuclear and mitochondrial ribosomal genes.Mol Biol Evol 17: 451 -457.

    PubMed  CAS  Google Scholar 

  • Weber B, Collins C, Robbins C et al.(1990) Characterization and organization of DNA sequences adjacent to the human telomere associated repeat (TTAGGG)n.Nucl Acids Res 18: 3353 -3361.

    PubMed  CAS  Google Scholar 

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Derjusheva, S., Kurganova, A., Habermann, F. et al. High chromosome conservation detected by comparative chromosome painting in chicken, pigeon and passerine birds. Chromosome Res 12, 715–723 (2004). https://doi.org/10.1023/B:CHRO.0000045779.50641.00

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