High expression of the second lysine decarboxylase gene, ldc, in Escherichia coli WC196 due to the recognition of the stop codon (TAG), at a position which corresponds to the 33th amino acid residue of sigma38, as a serine residue by the amber suppressor, supD

Biosci Biotechnol Biochem. 2000 Sep;64(9):2012-7. doi: 10.1271/bbb.64.2012.

Abstract

Escherichia coli WC196, which was obtained from the strain W3110 by nitrosoguanidine mutagenesis as an overproducer of lysine, produced approximately twenty times more cadaverine than did W3110, and had a twenty fold higher level of rpoS gene product, sigma38, than in W3110. Both WC196 and W3110 had a stop codon (TAG) in rpoS at position which corresponds to the 33th residue of sigma38 protein. In addition, WC196 but not W3110 had a mutation in the gene encoding Ser-tRNA (SerU), called, supD. Analysis of the amino acid sequence of a sigma38 preparation from WC196 showed that the 33th residue of sigma38 is a serine residue. The deltarpoS deltacadA mutant of E. coli W3110 harboring the plasmid containing rpoS, in which the TAG codon was converted to a TCG codon for serine-33 residue of sigma38, expressed a significant amount of Ldc and accumulated a large amount of sigma38. However, the deltarpoS deltacadA mutant of W3110 with the plasmid containing the intact rpoS from W3110 could synthesize neither sigma38 nor Ldc significantly.

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics*
  • Bacterial Proteins / metabolism
  • Base Sequence
  • Carboxy-Lyases / genetics*
  • Carboxy-Lyases / metabolism*
  • Cloning, Molecular
  • Codon, Terminator
  • Escherichia coli / enzymology*
  • Escherichia coli / genetics*
  • Gene Expression Regulation, Bacterial* / drug effects
  • Gene Expression Regulation, Enzymologic / drug effects
  • Genes, Suppressor
  • Kinetics
  • Molecular Sequence Data
  • Mutagenesis
  • Plasmids
  • RNA, Transfer, Amino Acyl / genetics*
  • Recombinant Proteins / metabolism
  • Sigma Factor / chemistry
  • Sigma Factor / genetics*
  • Sigma Factor / metabolism

Substances

  • Bacterial Proteins
  • Codon, Terminator
  • RNA, Transfer, Amino Acyl
  • Recombinant Proteins
  • Sigma Factor
  • sigma factor KatF protein, Bacteria
  • Carboxy-Lyases
  • lysine decarboxylase