Characterization of a specificity factor for an AAA+ ATPase: assembly of SspB dimers with ssrA-tagged proteins and the ClpX hexamer

Chem Biol. 2002 Nov;9(11):1237-45. doi: 10.1016/s1074-5521(02)00268-5.

Abstract

SspB, a specificity factor for the ATP-dependent ClpXP protease, stimulates proteolysis of protein substrates bearing the ssrA degradation tag. The SspB protein is shown here to form a stable homodimer with two independent binding sites for ssrA-tagged proteins or peptides. SspB by itself binds to ClpX and stimulates the ATPase activity of this enzyme. In the presence of ATPgammaS, a ternary complex of SspB, GFP-ssrA, and the ClpX ATPase was sufficiently stable to isolate by gel-filtration or ion-exchange chromatography. This complex consists of one SspB dimer, two molecules of GFP-ssrA, and one ClpX hexamer. SspB dimers do not commit bound substrates to ClpXP degradation but increase the affinity and cooperativity of binding of ssrA-tagged substrates to ClpX, facilitating enhanced degradation at low substrate concentrations.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • ATPases Associated with Diverse Cellular Activities
  • Adenosine Triphosphatases / metabolism*
  • Carrier Proteins / metabolism*
  • Cleavage And Polyadenylation Specificity Factor / metabolism*
  • Dimerization
  • Endopeptidase Clp
  • Escherichia coli Proteins / metabolism*
  • Green Fluorescent Proteins
  • Luminescent Proteins
  • Molecular Chaperones
  • Protein Binding
  • Proteins / metabolism
  • Serine Endopeptidases / metabolism*

Substances

  • Carrier Proteins
  • Cleavage And Polyadenylation Specificity Factor
  • Escherichia coli Proteins
  • Luminescent Proteins
  • Molecular Chaperones
  • Proteins
  • sspB protein, E coli
  • Green Fluorescent Proteins
  • Serine Endopeptidases
  • ClpXP protease, E coli
  • Endopeptidase Clp
  • Adenosine Triphosphatases
  • ClpX protein, E coli
  • ATPases Associated with Diverse Cellular Activities