Posttranscriptional gene silencing is not compromised in the Arabidopsis CARPEL FACTORY (DICER-LIKE1) mutant, a homolog of Dicer-1 from Drosophila

Curr Biol. 2003 Feb 4;13(3):236-40. doi: 10.1016/s0960-9822(03)00010-1.

Abstract

Posttranscriptional silencing (PTGS) in plants, nematodes, Drosophila, and perhaps all eukaryotes operates by sequence-specific degradation or translational inhibition of the target mRNA. These processes are mediated by duplexed RNA. In Drosophila and nematodes, double-stranded (ds)RNA or self-complementary RNA is processed into fragments of approximately 21 nt by Dicer-1. These small interfering RNAs (siRNAs) serve as guides to target degradation of homologous single-stranded (ss)RNA. In some cases, the approximately 21 nt guide fragments derived from endogenous, imperfectly self-complementary RNAs cause translational inhibition of their target mRNAs, with which they have substantial, but not perfect sequence complementarity. These small temporal RNAs (stRNAs) belong to a class of noncoding microRNAs (miRNAs), 20-24 nt in length, that are found in flies, plants, nematodes, and mammals. In nematodes, the Dicer-1 enzyme catalyzes the production of both siRNA and stRNA. Mutation of the Arabidopsis Dicer-1 homolog, CARPEL FACTORY (CAF), blocks miRNA production. Here, we report that the same caf mutant does not block either PTGS or siRNA production induced by self-complementary hairpin RNA. This suggests either that this mutation only impairs miRNA formation or, more interestingly, that plants have two distinct dicer-like enzymes, one for miRNA and another for siRNAi production.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Arabidopsis / genetics
  • Arabidopsis / metabolism*
  • Arabidopsis Proteins / classification
  • Arabidopsis Proteins / genetics*
  • Arabidopsis Proteins / metabolism
  • Cell Cycle Proteins / classification
  • Cell Cycle Proteins / genetics*
  • Cell Cycle Proteins / metabolism
  • Drosophila melanogaster / genetics*
  • Endoribonucleases / classification
  • Endoribonucleases / genetics*
  • Endoribonucleases / metabolism
  • MicroRNAs / metabolism
  • Multigene Family
  • Phylogeny
  • RNA Interference*
  • RNA, Small Interfering / metabolism
  • Ribonuclease III

Substances

  • Arabidopsis Proteins
  • Cell Cycle Proteins
  • MicroRNAs
  • RNA, Small Interfering
  • Endoribonucleases
  • DCL1 protein, Arabidopsis
  • Ribonuclease III