Y14 and hUpf3b form an NMD-activating complex

Mol Cell. 2003 Apr;11(4):939-49. doi: 10.1016/s1097-2765(03)00142-4.

Abstract

Messenger RNAs with premature translation termination codons (PTCs) are degraded by nonsense-mediated mRNA decay (NMD). In mammals, PTCs are discriminated from physiological stop codons by a process thought to involve the splicing-dependent deposition of an exon junction complex (EJC), EJC-mediated recruitment of Upf3, and Upf2 binding to the N terminus of Upf3. Here, we identify a conserved domain of hUpf3b that mediates an interaction with the EJC protein Y14. Tethered function analysis shows that the Y14/hUpf3b interaction is essential for NMD, while surprisingly the interaction between hUpf3b and hUpf2 is not. Nonetheless, hUpf2 is necessary for NMD mediated by tethered Y14. RNAi-induced knockdown and Y14 repletion of siRNA-treated cells implicates Y14 in the degradation of beta-globin NS39 mRNA and demonstrates that Y14 is required for NMD induced by tethered hUpf3b. These results uncover a direct role of Y14 in NMD and suggest an unexpected hierarchy in the assembly of NMD complexes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence / genetics
  • Beta-Globulins / genetics
  • Beta-Globulins / metabolism
  • Codon, Nonsense / genetics
  • Codon, Nonsense / metabolism*
  • Eukaryotic Cells / metabolism*
  • Exons / genetics*
  • Humans
  • Macromolecular Substances
  • Protein Biosynthesis / genetics*
  • Protein Structure, Tertiary / genetics
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism*
  • RNA, Small Interfering
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism*
  • Transcription Factors / genetics
  • Transcription Factors / metabolism

Substances

  • Beta-Globulins
  • Codon, Nonsense
  • Macromolecular Substances
  • RBM8A protein, human
  • RNA, Messenger
  • RNA, Small Interfering
  • RNA-Binding Proteins
  • Transcription Factors
  • UPF2 protein, human
  • UPF3B protein, human