Two W-containing formate dehydrogenases (CO2-reductases) involved in syntrophic propionate oxidation by Syntrophobacter fumaroxidans

Eur J Biochem. 2003 Jun;270(11):2476-85. doi: 10.1046/j.1432-1033.2003.03619.x.

Abstract

Two formate dehydrogenases (CO2-reductases) (FDH-1 and FDH-2) were isolated from the syntrophic propionate-oxidizing bacterium Syntrophobacter fumaroxidans. Both enzymes were produced in axenic fumarate-grown cells as well as in cells which were grown syntrophically on propionate with Methanospirillum hungatei as the H2 and formate scavenger. The purified enzymes exhibited extremely high formate-oxidation and CO2-reduction rates, and low Km values for formate. For the enzyme designated FDH-1, a specific formate oxidation rate of 700 U.mg-1 and a Km for formate of 0.04 mm were measured when benzyl viologen was used as an artificial electron acceptor. The enzyme designated FDH-2 oxidized formate with a specific activity of 2700 U.mg-1 and a Km of 0.01 mm for formate with benzyl viologen as electron acceptor. The specific CO2-reduction (to formate) rates measured for FDH-1 and FDH-2, using dithionite-reduced methyl viologen as the electron donor, were 900 U.mg-1 and 89 U.mg-1, respectively. From gel filtration and polyacrylamide gel electrophoresis it was concluded that FDH-1 is composed of three subunits (89 +/- 3, 56 +/- 2 and 19 +/- 1 kDa) and has a native molecular mass of approximately 350 kDa. FDH-2 appeared to be a heterodimer composed of a 92 +/- 3 kDa and a 33 +/- 2 kDa subunit. Both enzymes contained tungsten and selenium, while molybdenum was not detected. EPR spectroscopy suggested that FDH-1 contains at least four [2Fe-2S] clusters per molecule and additionally paramagnetically coupled [4Fe-4S] clusters. FDH-2 contains at least two [4Fe-4S] clusters per molecule. As both enzymes are produced under all growth conditions tested, but with differences in levels, expression may depend on unknown parameters.

MeSH terms

  • Carbon Dioxide / metabolism
  • Deltaproteobacteria / metabolism*
  • Electron Spin Resonance Spectroscopy
  • Electrons
  • Electrophoresis, Polyacrylamide Gel
  • Formate Dehydrogenases / chemistry*
  • Formate Dehydrogenases / metabolism
  • Formates / metabolism
  • Hydrogen / metabolism
  • Kinetics
  • Oxygen / metabolism*
  • Paraquat / pharmacology
  • Propionates / chemistry*
  • Protein Structure, Tertiary
  • Temperature

Substances

  • Formates
  • Propionates
  • formic acid
  • Carbon Dioxide
  • Hydrogen
  • Formate Dehydrogenases
  • Paraquat
  • Oxygen