Methylocella tundrae sp. nov., a novel methanotrophic bacterium from acidic tundra peatlands

Int J Syst Evol Microbiol. 2004 Jan;54(Pt 1):151-156. doi: 10.1099/ijs.0.02805-0.

Abstract

A novel species, Methylocella tundrae, is proposed for three methanotrophic strains (T4T, TCh1 and TY1) isolated from acidic Sphagnum tundra peatlands. These strains are aerobic, Gram-negative, non-motile, dinitrogen-fixing rods that possess a soluble methane monooxygenase and utilize the serine pathway for carbon assimilation. Strains T4T, TCh1 and TY1 are moderately acidophilic organisms capable of growth between pH 4.2 and 7.5 (optimum 5.5-6.0) and between 5 and 30 degrees C (optimum 15 degrees C). The major phospholipid fatty acid is 18:1omega7c. The DNA G+C content of strain T4T is 63.3 mol%. The three strains possess almost identical 16S rRNA gene sequences and are most closely related to two previously identified species of Methylocella, Methylocella palustris (97% similarity) and Methylocella silvestris (97.5% similarity). DNA-DNA hybridization values of strain T4T with Methylocella palustris KT and Methylocella silvestris BL2T were respectively 27 and 36%. Thus, the tundra strains represent a novel species, for which the name Methylocella tundrae sp. nov. is proposed. Strain T4T (=DSM 15673T=NCIMB 13949T) is the type strain.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carbon / metabolism
  • Cold Climate
  • Enzymes / metabolism
  • Fatty Acids / analysis
  • Hydrogen-Ion Concentration
  • Molecular Sequence Data
  • Phylogeny
  • Rhizobiaceae / classification*
  • Rhizobiaceae / cytology
  • Rhizobiaceae / genetics
  • Rhizobiaceae / isolation & purification
  • Russia
  • Serine / metabolism
  • Soil Microbiology*

Substances

  • Enzymes
  • Fatty Acids
  • Serine
  • Carbon

Associated data

  • GENBANK/AJ555244
  • GENBANK/AJ555245
  • GENBANK/AJ555246