Cis-preferential LINE-1 reverse transcriptase activity in ribonucleoprotein particles

Nat Struct Mol Biol. 2006 Jul;13(7):655-60. doi: 10.1038/nsmb1107. Epub 2006 Jun 18.

Abstract

LINE-1 retrotransposons (L1s) constitute approximately 17% of human DNA, and their activity continues to affect genome evolution. Retrotransposition-competent human L1s encode two proteins required for their mobility (ORF1p and ORF2p); however, biochemical activities associated with ORF2p have been difficult to detect in cells. Here, we show for the first time the colocalization of L1 RNA, ORF1p and ORF2p to a putative ribonucleoprotein retrotransposition intermediate. We further demonstrate that ORF2p preferentially uses its encoding RNA as a template for reverse transcription. Thus, our data provide the first biochemical evidence supporting the cis-preferential action of the L1 reverse transcriptase.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • HeLa Cells
  • Humans
  • Long Interspersed Nucleotide Elements / genetics*
  • Molecular Sequence Data
  • Nucleic Acid Conformation
  • Open Reading Frames
  • RNA-Directed DNA Polymerase / metabolism*
  • Recombinant Proteins / metabolism
  • Retroelements / genetics*
  • Reverse Transcriptase Polymerase Chain Reaction
  • Ribonucleoproteins / metabolism*
  • Transfection

Substances

  • Recombinant Proteins
  • Retroelements
  • Ribonucleoproteins
  • RNA-Directed DNA Polymerase