Double-stranded DNA translocation: structure and mechanism of hexameric FtsK

Mol Cell. 2006 Aug;23(4):457-69. doi: 10.1016/j.molcel.2006.06.019.

Abstract

FtsK is a DNA translocase that coordinates chromosome segregation and cell division in bacteria. In addition to its role as activator of XerCD site-specific recombination, FtsK can translocate double-stranded DNA (dsDNA) rapidly and directionally and reverse direction. We present crystal structures of the FtsK motor domain monomer, showing that it has a RecA-like core, the FtsK hexamer, and also showing that it is a ring with a large central annulus and a dodecamer consisting of two hexamers, head to head. Electron microscopy (EM) demonstrates the DNA-dependent existence of hexamers in solution and shows that duplex DNA passes through the middle of each ring. Comparison of FtsK monomer structures from two different crystal forms highlights a conformational change that we propose is the structural basis for a rotary inchworm mechanism of DNA translocation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphate / metabolism
  • Crystallography, X-Ray
  • DNA Helicases / metabolism
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / metabolism*
  • DNA, Bacterial / ultrastructure
  • Escherichia coli / chemistry*
  • Escherichia coli Proteins / chemistry*
  • Escherichia coli Proteins / isolation & purification
  • Escherichia coli Proteins / metabolism*
  • Escherichia coli Proteins / ultrastructure
  • Hydrolysis
  • Integrases / metabolism
  • Membrane Proteins / chemistry*
  • Membrane Proteins / isolation & purification
  • Membrane Proteins / metabolism*
  • Membrane Proteins / ultrastructure
  • Models, Genetic
  • Models, Molecular
  • Nucleic Acid Conformation
  • Pseudomonas aeruginosa / chemistry*
  • RNA Helicases / metabolism
  • Rec A Recombinases / metabolism
  • Recombination, Genetic

Substances

  • DNA, Bacterial
  • Escherichia coli Proteins
  • FtsK protein, E coli
  • Membrane Proteins
  • Adenosine Triphosphate
  • Integrases
  • Rec A Recombinases
  • DNA Helicases
  • RNA Helicases

Associated data

  • PDB/2IUS
  • PDB/2IUT
  • PDB/2IUU