Energetics of an n --> pi interaction that impacts protein structure

Org Lett. 2006 Oct 12;8(21):4695-7. doi: 10.1021/ol061569t.

Abstract

[structure: see text] The trans/cis ratio of the amide bond in N-formylproline phenylesters correlates with electron withdrawal by a para substituent. The slope of the Hammett plot (rho = 0.26) is indicative of a substantial effect. This effect arises from a favorable n --> pi interaction between the amide oxygen and ester carbonyl. In a polypeptide chain, an analogous interaction can stabilize the conformation of trans peptide bonds, alpha-helices, and polyproline type-II helices.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Models, Chemical*
  • Protein Conformation
  • Proteins / chemistry*
  • Stereoisomerism
  • Thermodynamics

Substances

  • Proteins