Microgravity-related changes in gene expression after short-term exposure of Arabidopsis thaliana cell cultures

Protoplasma. 2006 Dec;229(2-4):155-62. doi: 10.1007/s00709-006-0203-1. Epub 2006 Dec 16.

Abstract

Cell cultures of Arabidopsis thaliana (cv. Columbia) were used to screen for early alterations in gene expression as a response to altered gravitational fields. Genes of interest were selected from a larger group whose expression was altered under hypergravity (microarray study; M. Martzivanou and R. Hampp, Physiol. Plant. 118: 221-231, 2003). Transcriptional changes of these genes were studied within a time frame of up to 10 min of exposure to microgravity in a sounding-rocket experiment, to clinorotation (random positioning machine), and to hypergravity (8 g). We could identify a set of nine genes (mainly components of signaling chains) with increased transcript levels after about 6 min of exposure to microgravity. As clinorotation and hypergravity treatment did not alter the respective transcript amounts, we assume that the identified genes could be involved in a microgravity-related response.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabidopsis / genetics*
  • Arabidopsis / metabolism
  • Arabidopsis Proteins / genetics*
  • Arabidopsis Proteins / metabolism
  • Cells, Cultured
  • Centrifugation
  • Gene Expression Regulation, Plant*
  • Gravity Sensing*
  • Hypergravity
  • Oligonucleotide Array Sequence Analysis
  • RNA, Plant / metabolism
  • Reverse Transcriptase Polymerase Chain Reaction
  • Rotation
  • Time Factors
  • Transcription, Genetic
  • Weightlessness Simulation*

Substances

  • Arabidopsis Proteins
  • RNA, Plant