Relative abundance of the human mitochondrial transcription system and distinct roles for h-mtTFB1 and h-mtTFB2 in mitochondrial biogenesis and gene expression

Nucleic Acids Res. 2007;35(12):4042-54. doi: 10.1093/nar/gkm424. Epub 2007 Jun 8.

Abstract

Human mitochondrial transcription requires the bacteriophage-related RNA polymerase, POLRMT, the mtDNA-binding protein, h-mtTFA/TFAM, and two transcription factors/rRNA methyltransferases, h-mtTFB1 and h-mtTFB2. Here, we determined the steady-state levels of these core transcription components and examined the consequences of purposeful elevation of h-mtTFB1 or h-mtTFB2 in HeLa cells. On a per molecule basis, we find an approximately 6-fold excess of POLRMT to mtDNA and approximately 3-fold more h-mtTFB2 than h-mtTFB1. We also estimate h-mtTFA at approximately 50 molecules/mtDNA, a ratio predicted to support robust transcription, but not to coat mtDNA. Consistent with a role for h-mtTFB2 in transcription and transcription-primed replication, increased mitochondrial DNA and transcripts result from its over-expression. This is accompanied by increased translation rates of most, but not all mtDNA-encoded proteins. Over-expression of h-mtTFB1 did not significantly influence these parameters, but did result in increased mitochondrial biogenesis. Furthermore, h-mtTFB1 mRNA and protein are elevated in response to h-mtTFB2 over-expression, suggesting the existence of a retrograde signal to the nucleus to coordinately regulate expression of these related factors. Altogether, our results provide a framework for understanding the regulation of human mitochondrial transcription in vivo and define distinct roles for h-mtTFB1 and h-mtTFB2 in mitochondrial biogenesis and gene expression that together likely fine-tune mitochondrial function.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Aminoglycosides / pharmacology
  • DNA, Mitochondrial / biosynthesis
  • DNA-Binding Proteins / metabolism
  • DNA-Binding Proteins / physiology*
  • DNA-Directed RNA Polymerases / metabolism
  • Gene Expression Regulation
  • Genes, Mitochondrial*
  • HeLa Cells
  • Humans
  • Membrane Potentials
  • Methyltransferases / metabolism
  • Methyltransferases / physiology*
  • Mitochondria / genetics*
  • Mitochondria / metabolism
  • Mitochondria / physiology
  • Mitochondrial Proteins / biosynthesis
  • Mitochondrial Proteins / genetics
  • Mitochondrial Proteins / metabolism
  • Mitochondrial Proteins / physiology*
  • Oxidative Phosphorylation
  • Protein Biosynthesis
  • Protein Subunits / biosynthesis
  • Protein Subunits / genetics
  • Protein Transport
  • Transcription Factors / metabolism
  • Transcription Factors / physiology*
  • Transcription, Genetic*

Substances

  • Aminoglycosides
  • DNA, Mitochondrial
  • DNA-Binding Proteins
  • Mitochondrial Proteins
  • Protein Subunits
  • TFB1M protein, human
  • Transcription Factors
  • Methyltransferases
  • TFB2M protein, human
  • DNA-Directed RNA Polymerases
  • POLRMT protein, human
  • kasugamycin