The effect of sequence context on spontaneous Polzeta-dependent mutagenesis in Saccharomyces cerevisiae

Nucleic Acids Res. 2008 Apr;36(6):2082-93. doi: 10.1093/nar/gkn054. Epub 2008 Feb 14.

Abstract

The Polzeta translesion synthesis (TLS) DNA polymerase is responsible for over 50% of spontaneous mutagenesis and virtually all damage-induced mutagenesis in yeast. We previously demonstrated that reversion of the lys2DeltaA746 -1 frameshift allele detects a novel type of +1 frameshift that is accompanied by one or more base substitutions and depends completely on the activity of Polzeta. These 'complex' frameshifts accumulate at two discrete hotspots (HS1 and HS2) in the absence of nucleotide excision repair, and accumulate at a third location (HS3) in the additional absence of the translesion polymerase Poleta. The current study investigates the sequence requirements for accumulation of Polzeta-dependent complex frameshifts at these hotspots. We observed that transposing 13 bp of identity from HS1 or HS3 to a new location within LYS2 was sufficient to recapitulate these hotspots. In addition, altering the sequence immediately upstream of HS2 had no effect on the activity of the hotspot. These data support a model in which misincorporation opposite a lesion precedes and facilitates the selected slippage event. Finally, analysis of nonsense mutation revertants indicates that Polzeta can simultaneously introduce multiple base substitutions in the absence of an accompanying frameshift event.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • DNA Damage
  • DNA, Fungal / chemistry
  • DNA-Directed DNA Polymerase / metabolism*
  • Frameshift Mutation*
  • Molecular Sequence Data
  • Mutagenesis*
  • Saccharomyces cerevisiae / enzymology
  • Saccharomyces cerevisiae / genetics*
  • Saccharomyces cerevisiae Proteins / metabolism*
  • Sequence Analysis, DNA

Substances

  • DNA, Fungal
  • Saccharomyces cerevisiae Proteins
  • DNA polymerase zeta
  • DNA-Directed DNA Polymerase
  • REV3 protein, S cerevisiae