Reverse transcription loop-mediated isothermal amplification for the rapid detection of infectious bronchitis virus in infected chicken tissues

Mol Cell Probes. 2010 Apr;24(2):104-6. doi: 10.1016/j.mcp.2009.10.001. Epub 2009 Oct 14.

Abstract

A reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay targeting the nucleocapsid phosphoprotein gene of infectious bronchitis virus (IBV) was developed. The detection limits for the IBV RT-LAMP assay were 10(1) 50% egg infection dose (EID(50)) per 50 microl of titrated viruses and no cross-reaction of IBV RT-LAMP was found when tested with other viruses including Newcastle disease virus (NDV), avian reovirus (ARV), and infectious laryngotrachietis virus (ILTV) due to their mismatch with IBV RT-LAMP primers. A total of 187 clinical tissues samples (88 blood, 62 kidney and 37 lung) were evaluated and compared to conventional RT-PCR. The sensitivity of RT-LAMP and RT-PCR assays for detecting IBV RNA in clinical specimens was 99.5% and 98.4%, respectively. These findings showed that the RT-LAMP assay has potential usefulness for rapid and sensitive diagnosis in outbreak of IBV.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • Chickens / virology*
  • Coronavirus Infections / veterinary*
  • Coronavirus Infections / virology
  • DNA Primers
  • Electrophoresis, Agar Gel
  • Infectious bronchitis virus / genetics
  • Infectious bronchitis virus / isolation & purification*
  • Molecular Sequence Data
  • Organ Specificity
  • Polymerase Chain Reaction / methods*
  • Poultry Diseases / virology*
  • Reverse Transcription / genetics*
  • Sensitivity and Specificity
  • Temperature*

Substances

  • DNA Primers