genoPlotR: comparative gene and genome visualization in R

Bioinformatics. 2010 Sep 15;26(18):2334-5. doi: 10.1093/bioinformatics/btq413. Epub 2010 Jul 11.

Abstract

The amount of gene and genome data obtained by next-generation sequencing technologies generates a need for comparative visualization tools. Complementing existing software for comparison and exploration of genomics data, genoPlotR automatically creates publication-grade linear maps of gene and genomes, in a highly automatic, flexible and reproducible way.

Availability: genoPlotR is a platform-independent R package, available with full source code under a GPL2 license at R-Forge: http://genoplotr.r-forge.r-project.org/.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Chromosome Mapping
  • Genes
  • Genome
  • Humans
  • Software*