Study of DNA damage via the comet assay and base excision repair activities in rat brain neurons and astrocytes during aging

Mech Ageing Dev. 2011 Aug;132(8-9):374-81. doi: 10.1016/j.mad.2011.04.012. Epub 2011 May 11.

Abstract

Earlier we have used biochemical approach to assess the number of single (SSBs) and double (DSBs) strand breaks in brain cellular DNA. However, a quick method to obtain a reliable measure of DNA damage in cells was in need for population studies. Therefore, single cell gel electrophoresis technique (popularly known as "comet" assay) has been standardized using the Trevigen protocol. DNA damage was assessed in isolated neurons and astrocytes from the cortex of young (7 days), adult (6 months) and old (2 years). Marked increase is seen in DNA damage in terms SSBs and DSBs in both types of cells by 6 months of age, which increased further by 2 years of age. The number of 8-oxoguanine DNA glycosylase (OGG1) and uracil DNA glycosylase (UDG) sensitive sites also increased in DNA with age with the simultaneous decrease in OGG1, UDG and AP endonuclease (APE1) activities. Thus the comet assay adapted to our lab conditions has proven to be useful for a quick assessment of DNA damage in a large number of samples that constitute our future studies.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aging / metabolism*
  • Aging / pathology
  • Animals
  • Astrocytes / metabolism*
  • Astrocytes / pathology
  • Cerebral Cortex / metabolism*
  • Cerebral Cortex / pathology
  • Comet Assay*
  • DNA Breaks, Double-Stranded*
  • DNA Breaks, Single-Stranded*
  • DNA Glycosylases / metabolism
  • DNA-(Apurinic or Apyrimidinic Site) Lyase / metabolism
  • Female
  • Male
  • Neurons / metabolism*
  • Neurons / pathology
  • Rats
  • Rats, Wistar
  • Uracil-DNA Glycosidase / metabolism

Substances

  • DNA Glycosylases
  • OGG1 protein, rat
  • Uracil-DNA Glycosidase
  • DNA-(Apurinic or Apyrimidinic Site) Lyase