Dual functions of the nucleus-encoded factor TDA1 in trapping and translation activation of atpA transcripts in Chlamydomonas reinhardtii chloroplasts

Plant J. 2011 Sep;67(6):1055-66. doi: 10.1111/j.1365-313X.2011.04657.x. Epub 2011 Jul 18.

Abstract

After endosymbiosis, organelles lost most of their initial genome. Moreover, expression of the few remaining genes became tightly controlled by the nucleus through trans-acting protein factors that are required for post-transcriptional expression (maturation/stability or translation) of a single (or a few) specific organelle target mRNA(s). Here, we characterize the nucleus-encoded TDA1 factor, which is specifically required for translation of the chloroplast atpA transcript that encodes subunit α of ATP synthase in Chlamydomonas reinhardtii. The sequence of TDA1 contains eight copies of a degenerate 38-residue motif, that we named octotrico peptide repeat (OPR), which has been previously described in a few other trans-acting factors targeted to the C. reinhardtii chloroplast. Interestingly, a proportion of the untranslated atpA transcripts are sequestered into high-density, non-polysomic, ribonucleoprotein complexes. Our results suggest that TDA1 has a dual function: (i) trapping a subset of untranslated atpA transcripts into non-polysomic complexes, and (ii) translational activation of these transcripts. We discuss these results in light of our previous observation that only a proportion of atpA transcripts are translated at any given time in the chloroplast of C. reinhardtii.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5' Untranslated Regions
  • Amino Acid Motifs
  • Amino Acid Sequence
  • Cell Nucleus / genetics
  • Chlamydomonas reinhardtii / genetics
  • Chlamydomonas reinhardtii / metabolism*
  • Chloroplast Proton-Translocating ATPases / genetics*
  • Chloroplast Proton-Translocating ATPases / metabolism
  • Chloroplasts / genetics
  • Chloroplasts / metabolism*
  • Cloning, Molecular
  • Gene Expression Regulation, Plant
  • Molecular Sequence Data
  • Plant Proteins / genetics*
  • Plant Proteins / metabolism*
  • Protein Biosynthesis
  • RNA, Messenger / biosynthesis
  • Ribonucleoproteins / metabolism

Substances

  • 5' Untranslated Regions
  • Plant Proteins
  • RNA, Messenger
  • Ribonucleoproteins
  • Chloroplast Proton-Translocating ATPases

Associated data

  • GENBANK/FR850045