Interrelationships between yeast ribosomal protein assembly events and transient ribosome biogenesis factors interactions in early pre-ribosomes

PLoS One. 2012;7(3):e32552. doi: 10.1371/journal.pone.0032552. Epub 2012 Mar 14.

Abstract

Early steps of eukaryotic ribosome biogenesis require a large set of ribosome biogenesis factors which transiently interact with nascent rRNA precursors (pre-rRNA). Most likely, concomitant with that initial contacts between ribosomal proteins (r-proteins) and ribosome precursors (pre-ribosomes) are established which are converted into robust interactions between pre-rRNA and r-proteins during the course of ribosome maturation. Here we analysed the interrelationship between r-protein assembly events and the transient interactions of ribosome biogenesis factors with early pre-ribosomal intermediates termed 90S pre-ribosomes or small ribosomal subunit (SSU) processome in yeast cells. We observed that components of the SSU processome UTP-A and UTP-B sub-modules were recruited to early pre-ribosomes independently of all tested r-proteins. On the other hand, groups of SSU processome components were identified whose association with early pre-ribosomes was affected by specific r-protein assembly events in the head-platform interface of the SSU. One of these components, Noc4p, appeared to be itself required for robust incorporation of r-proteins into the SSU head domain. Altogether, the data reveal an emerging network of specific interrelationships between local r-protein assembly events and the functional interactions of SSU processome components with early pre-ribosomes. They point towards some of these components being transient primary pre-rRNA in vivo binders and towards a role for others in coordinating the assembly of major SSU domains.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Mutation / genetics
  • Protein Binding
  • RNA Precursors / metabolism
  • RNA, Ribosomal, 16S / metabolism
  • RNA, Ribosomal, 18S / metabolism
  • Ribosomal Proteins / isolation & purification
  • Ribosomal Proteins / metabolism*
  • Ribosome Subunits, Small
  • Ribosomes / metabolism*
  • Saccharomyces cerevisiae / metabolism*
  • Saccharomyces cerevisiae Proteins / isolation & purification
  • Saccharomyces cerevisiae Proteins / metabolism*

Substances

  • RNA Precursors
  • RNA, Ribosomal, 16S
  • RNA, Ribosomal, 18S
  • Ribosomal Proteins
  • Saccharomyces cerevisiae Proteins