PaR-PaR laboratory automation platform

ACS Synth Biol. 2013 May 17;2(5):216-22. doi: 10.1021/sb300075t. Epub 2012 Oct 9.

Abstract

Labor-intensive multistep biological tasks, such as the construction and cloning of DNA molecules, are prime candidates for laboratory automation. Flexible and biology-friendly operation of robotic equipment is key to its successful integration in biological laboratories, and the efforts required to operate a robot must be much smaller than the alternative manual lab work. To achieve these goals, a simple high-level biology-friendly robot programming language is needed. We have developed and experimentally validated such a language: Programming a Robot (PaR-PaR). The syntax and compiler for the language are based on computer science principles and a deep understanding of biological workflows. PaR-PaR allows researchers to use liquid-handling robots effectively, enabling experiments that would not have been considered previously. After minimal training, a biologist can independently write complicated protocols for a robot within an hour. Adoption of PaR-PaR as a standard cross-platform language would enable hand-written or software-generated robotic protocols to be shared across laboratories.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Algorithms*
  • Automation, Laboratory / instrumentation
  • Automation, Laboratory / methods*
  • Equipment Design
  • Programming Languages*
  • Robotics / instrumentation
  • Robotics / methods*
  • Software*
  • Synthetic Biology / instrumentation*
  • Synthetic Biology / methods*