Transient oligomerization of the SARS-CoV N protein--implication for virus ribonucleoprotein packaging

PLoS One. 2013 May 23;8(5):e65045. doi: 10.1371/journal.pone.0065045. Print 2013.

Abstract

The nucleocapsid (N) phosphoprotein of the severe acute respiratory syndrome coronavirus (SARS-CoV) packages the viral genome into a helical ribonucleocapsid and plays a fundamental role during viral self-assembly. The N protein consists of two structural domains interspersed between intrinsically disordered regions and dimerizes through the C-terminal structural domain (CTD). A key activity of the protein is the ability to oligomerize during capsid formation by utilizing the dimer as a building block, but the structural and mechanistic bases of this activity are not well understood. By disulfide trapping technique we measured the amount of transient oligomers of N protein mutants with strategically located cysteine residues and showed that CTD acts as a primary transient oligomerization domain in solution. The data is consistent with the helical oligomer packing model of N protein observed in crystal. A systematic study of the oligomerization behavior revealed that altering the intermolecular electrostatic repulsion through changes in solution salt concentration or phosphorylation-mimicking mutations affects oligomerization propensity. We propose a biophysical mechanism where electrostatic repulsion acts as a switch to regulate N protein oligomerization.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Substitution
  • Calcium Carbonate
  • Citrates
  • Cystine / chemistry
  • Drug Combinations
  • Magnesium Oxide
  • Models, Molecular
  • Mutagenesis, Site-Directed
  • Nucleocapsid Proteins / chemistry*
  • Nucleocapsid Proteins / genetics
  • Phosphorylation
  • Protein Interaction Domains and Motifs
  • Protein Multimerization
  • Protein Processing, Post-Translational
  • Severe acute respiratory syndrome-related coronavirus*
  • Virus Assembly

Substances

  • Citrates
  • Drug Combinations
  • Nucleocapsid Proteins
  • Suby's G solution
  • Magnesium Oxide
  • Cystine
  • Calcium Carbonate