Advances in lectin microarray technology: optimized protocols for piezoelectric print conditions

Curr Protoc Chem Biol. 2013;5(1):1-23. doi: 10.1002/9780470559277.ch120035.

Abstract

Lectin microarray technology has been used to profile the glycosylation of a multitude of biological and clinical samples, leading to new clinical biomarkers and advances in glycobiology. Lectin microarrays, which include >90 plant lectins, recombinant lectins, and selected antibodies, are used to profile N-linked, O-linked, and glycolipid glycans. The specificity and depth of glycan profiling depends upon the carbohydrate-binding proteins arrayed. The current set targets mammalian carbohydrates including fucose, high mannose, branched and complex N-linked, α- and β-galactose and GalNAc, α-2,3- and α-2,6-sialic acid, LacNAc, and Lewis X epitopes. Previous protocols have described the use of a contact microarray printer for lectin microarray production. Here, an updated protocol that uses a non-contact, piezoelectric printer, which leads to increased lectin activity on the array, is presented. Optimization of print and sample hybridization conditions and methods of analysis are discussed.

Keywords: Nano‐Plotter; carbohydrate analysis; glycomics; lectin microarray; piezoelectric.

MeSH terms

  • Animals
  • Carbohydrates / analysis
  • Lectins / chemistry*
  • Protein Array Analysis / instrumentation
  • Protein Array Analysis / methods*
  • Research Design
  • Staining and Labeling

Substances

  • Carbohydrates
  • Lectins