Emerging roles for RNA polymerase II CTD in Arabidopsis

Trends Plant Sci. 2013 Nov;18(11):633-43. doi: 10.1016/j.tplants.2013.07.001. Epub 2013 Jul 30.

Abstract

Post-translational modifications of the carboxy-terminal domain of the largest subunit of RNA polymerase II (RNAPII CTD) provide recognition marks to coordinate recruitment of numerous nuclear factors controlling transcription, cotranscriptional RNA processing, chromatin remodeling, and RNA export. Compared with the progress in yeast and mammals, deciphering the regulatory roles of position-specific combinatorial CTD modifications, the so-called CTD code, is still at an early stage in plants. In this review, we discuss some of the recent advances in understanding of the molecular mechanisms controlling the deposition and recognition of RNAPII CTD marks in plants during the transcriptional cycle and highlight some intriguing differences between regulatory components characterized in yeast, mammals, and plants.

Keywords: CTD kinase; RNA polymerase II CTD; RNA processing; histone mark; miRNA; transcription.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • Arabidopsis / enzymology*
  • Arabidopsis / genetics
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / metabolism
  • Humans
  • Mammals
  • Models, Biological
  • Phosphoprotein Phosphatases / genetics
  • Phosphorylation
  • Protein Kinases / genetics
  • Protein Processing, Post-Translational*
  • Protein Structure, Tertiary
  • RNA Polymerase II / genetics
  • RNA Polymerase II / metabolism*
  • Saccharomyces cerevisiae / enzymology
  • Saccharomyces cerevisiae / genetics
  • Species Specificity
  • Transcription, Genetic*

Substances

  • Arabidopsis Proteins
  • Protein Kinases
  • carboxy-terminal domain kinase
  • RNA Polymerase II
  • Phosphoprotein Phosphatases
  • carboxy-terminal domain phosphatase