Enhanced stabilization of a stable single domain antibody for SEB toxin by random mutagenesis and stringent selection

Protein Eng Des Sel. 2014 Mar;27(3):89-95. doi: 10.1093/protein/gzu001. Epub 2014 Jan 30.

Abstract

Single domain antibodies, recombinant variable heavy domains derived from the unique heavy-chain only antibodies found in camelids and sharks, are exceptionally rugged due to their ability to refold following heat or chemical denaturation. In addition, a number of single domain antibodies have been found to possess high melting points which provide an even greater degree of stability; one of these, llama-derived A3, is a binder of Staphylococcal enterotoxin B and has a Tm of 83.5 °C. In this work, we utilized random mutagenesis and stringent selection in an effort to obtain variants of A3 with even higher melting points. This effort resulted in the selection of a double mutant, A3-T28I-S72I, which has a melting point of 90.0 °C and near wild-type affinity for the target antigen. We further characterized the mutations individually to determine that while both contributed to the thermal stabilization, the T28I mutation accounted for ∼ 4.1 °C of the 6.5 °C increase. This work demonstrates that by the addition of relatively subtle changes it is possible to further improve the melting temperature of single domain antibodies that are already remarkably stable.

Keywords: differential scanning calorimetry; phage display; random mutagenesis; single domain antibody; thermal stabilization.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Camelids, New World
  • Enterotoxins / metabolism*
  • Molecular Sequence Data
  • Mutagenesis
  • Protein Engineering / methods*
  • Protein Stability
  • Recombinant Proteins* / chemistry
  • Recombinant Proteins* / genetics
  • Recombinant Proteins* / metabolism
  • Sequence Alignment
  • Single-Domain Antibodies* / chemistry
  • Single-Domain Antibodies* / genetics
  • Single-Domain Antibodies* / metabolism
  • Temperature

Substances

  • Enterotoxins
  • Recombinant Proteins
  • Single-Domain Antibodies
  • enterotoxin B, staphylococcal