Nuclear factor Y-mediated H3K27me3 demethylation of the SOC1 locus orchestrates flowering responses of Arabidopsis

Nat Commun. 2014 Aug 8:5:4601. doi: 10.1038/ncomms5601.

Abstract

Nuclear factor Y (NF-Y) is a conserved heterotrimeric transcription factor complex that binds to the CCAAT motifs within the promoter region of many genes. In plants, a large number of genes code for variants of each NF-YA, B or C subunit that can assemble in a combinatorial fashion. Here, we report the discovery of an Arabidopsis NF-Y complex that exerts epigenetic control over flowering time by integrating environmental and developmental signals. We show that NF-Y interacts with CONSTANS in the photoperiod pathway and DELLAs in the gibberellin pathway, to directly regulate the transcription of SOC1, a major floral pathway integrator. This NF-Y complex binds to a unique cis-element within the SOC1 promoter to modulate trimethylated H3K27 levels, partly through a H3K27 demethylase REF6. Our findings establish NF-Y complexes as critical mediators of epigenetic marks that regulate the response to environmental or intrinsic signals in plants.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Motifs
  • Arabidopsis / physiology*
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / metabolism*
  • Base Sequence
  • CCAAT-Binding Factor / metabolism*
  • Chromatin Immunoprecipitation
  • DNA-Binding Proteins / metabolism
  • Epigenesis, Genetic*
  • Flowers / physiology
  • Gene Expression Regulation, Plant
  • Gibberellins / metabolism
  • Glutathione Transferase / metabolism
  • Histones / metabolism*
  • MADS Domain Proteins / genetics
  • MADS Domain Proteins / metabolism*
  • Methylation
  • Molecular Sequence Data
  • Photoperiod
  • Plasmids / metabolism
  • Promoter Regions, Genetic
  • Protein Binding
  • Signal Transduction
  • Transcription Factors / metabolism
  • Two-Hybrid System Techniques

Substances

  • AGL20 protein, Arabidopsis
  • Arabidopsis Proteins
  • CCAAT-Binding Factor
  • CONSTANS protein, Arabidopsis
  • DNA-Binding Proteins
  • GAI protein, Arabidopsis
  • Gibberellins
  • Histones
  • MADS Domain Proteins
  • REF6 protein, Arabidopsis
  • Transcription Factors
  • nuclear factor Y
  • Glutathione Transferase