Tissue-specific patterns of gene expression in the epithelium and stroma of normal colon in healthy individuals in an aspirin intervention trial

BMC Med Genet. 2015 Mar 24:16:18. doi: 10.1186/s12881-015-0161-6.

Abstract

Background: Regular aspirin use reduces colon adenoma and carcinoma incidence. UDP-glucuronosyltransferases (UGT) are involved in aspirin metabolism and clearance, and variant alleles in UGT1A6 have been shown to alter salicylic acid metabolism and risk of colon neoplasia.

Methods: In a randomized, cross-over, placebo-controlled trial of 44 healthy men and women, homozygous for UGT1A6*1 or UGT1A6*2, we explored differences between global epithelial and stromal expression, using Affymetrix U133 + 2.0 microarrays and tested effects of 60-day aspirin supplementation (325 mg/d) on epithelial and stromal gene expression and colon prostaglandin E2 (PGE2) levels.

Results: No statistically significant differences in gene expression were observed in response to aspirin or UGT1A6 genotype, but tissue PGE2 levels were lower with aspirin compared to placebo (p <0.001). Transcripts differentially expressed between epithelium and stroma (N = 4916, P <0.01, false discovery rate <0.001), included a high proportion of genes involved in cell signaling, cellular movement, and cancer. Genes preferentially expressed in epithelium were involved in drug and xenobiotic metabolism, fatty acid and lipid metabolism, apoptosis signaling, and ion transport. Genes preferentially expressed in stroma included those involved in inflammation, cellular adhesion, and extracellular matrix production. Wnt-Tcf4 pathway genes were expressed in both epithelium and stroma but differed by subcellular location.

Conclusions: These results suggest that, in healthy individuals, subtle effects of aspirin on gene expression in normal colon tissue are likely overwhelmed by inter-individual variability in microarray analyses. Differential expression of critical genes between colonic epithelium and stroma suggest that these tissue types need to be considered separately.

Publication types

  • Randomized Controlled Trial
  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aspirin / pharmacology*
  • Biological Transport / drug effects
  • Biological Transport / genetics
  • Cell Adhesion / drug effects
  • Cell Adhesion / genetics
  • Cellular Microenvironment / drug effects
  • Cellular Microenvironment / genetics
  • Colon / cytology*
  • Colon / drug effects
  • Colon / metabolism*
  • Dinoprostone / metabolism
  • Extracellular Matrix / drug effects
  • Extracellular Matrix / metabolism
  • Female
  • Gene Expression Regulation / drug effects*
  • Genotype
  • Glucuronosyltransferase / genetics
  • Healthy Volunteers*
  • Humans
  • Intestinal Mucosa / cytology
  • Intestinal Mucosa / drug effects*
  • Intestinal Mucosa / metabolism*
  • Male
  • Middle Aged
  • Organ Specificity
  • Pharmaceutical Preparations / metabolism
  • Wnt Signaling Pathway / drug effects
  • Wnt Signaling Pathway / genetics
  • Xenobiotics / metabolism
  • Young Adult

Substances

  • Pharmaceutical Preparations
  • Xenobiotics
  • UDP-glucuronosyltransferase, UGT1A6
  • Glucuronosyltransferase
  • Dinoprostone
  • Aspirin