Breaking bad: R-loops and genome integrity

Trends Cell Biol. 2015 Sep;25(9):514-22. doi: 10.1016/j.tcb.2015.05.003. Epub 2015 Jun 1.

Abstract

R-loops, nucleic acid structures consisting of an RNA-DNA hybrid and displaced single-stranded (ss) DNA, are ubiquitous in organisms from bacteria to mammals. First described in bacteria where they initiate DNA replication, it now appears that R-loops regulate diverse cellular processes such as gene expression, immunoglobulin (Ig) class switching, and DNA repair. Changes in R-loop regulation induce DNA damage and genome instability, and recently it was shown that R-loops are associated with neurodegenerative disorders. We discuss recent developments in the field; in particular, the regulation and effects of R-loops in cells, their effect on genomic and epigenomic stability, and their potential contribution to the origin of diseases including cancer and neurodegenerative disorders.

Keywords: R-loop; epigenomic stability; gene expression; genomic instability.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • Chromatin / physiology
  • Chromatin / ultrastructure
  • DNA Damage
  • DNA Repair
  • DNA, Single-Stranded / physiology*
  • Epigenesis, Genetic
  • Genomic Instability*
  • Humans

Substances

  • Chromatin
  • DNA, Single-Stranded