Initiation of mRNA translation in bacteria: structural and dynamic aspects

Cell Mol Life Sci. 2015 Nov;72(22):4341-67. doi: 10.1007/s00018-015-2010-3. Epub 2015 Aug 11.

Abstract

Initiation of mRNA translation is a major checkpoint for regulating level and fidelity of protein synthesis. Being rate limiting in protein synthesis, translation initiation also represents the target of many post-transcriptional mechanisms regulating gene expression. The process begins with the formation of an unstable 30S pre-initiation complex (30S pre-IC) containing initiation factors (IFs) IF1, IF2 and IF3, the translation initiation region of an mRNA and initiator fMet-tRNA whose codon and anticodon pair in the P-site following a first-order rearrangement of the 30S pre-IC produces a locked 30S initiation complex (30SIC); this is docked by the 50S subunit to form a 70S complex that, following several conformational changes, positional readjustments of its ligands and ejection of the IFs, becomes a 70S initiation complex productive in initiation dipeptide formation. The first EF-G-dependent translocation marks the beginning of the elongation phase of translation. Here, we review structural, mechanistic and dynamical aspects of this process.

Keywords: GTP; Protein synthesis; Translation initiation factors; fMet-tRNA; mRNA initiation region.

Publication types

  • Review

MeSH terms

  • Bacteria / genetics*
  • Bacteria / metabolism
  • Binding Sites / genetics
  • Codon, Initiator / genetics
  • Codon, Initiator / metabolism
  • Models, Genetic
  • Nucleic Acid Conformation
  • Peptide Initiation Factors / genetics
  • Peptide Initiation Factors / metabolism
  • Protein Biosynthesis*
  • RNA, Messenger / chemistry
  • RNA, Messenger / genetics*
  • RNA, Messenger / metabolism
  • RNA, Transfer, Met / chemistry
  • RNA, Transfer, Met / genetics*
  • RNA, Transfer, Met / metabolism
  • Ribosomes / metabolism

Substances

  • Codon, Initiator
  • Peptide Initiation Factors
  • RNA, Messenger
  • RNA, Transfer, Met
  • tRNA, formylmethionine-