Forecasting Zika Incidence in the 2016 Latin America Outbreak Combining Traditional Disease Surveillance with Search, Social Media, and News Report Data

PLoS Negl Trop Dis. 2017 Jan 13;11(1):e0005295. doi: 10.1371/journal.pntd.0005295. eCollection 2017 Jan.

Abstract

Background: Over 400,000 people across the Americas are thought to have been infected with Zika virus as a consequence of the 2015-2016 Latin American outbreak. Official government-led case count data in Latin America are typically delayed by several weeks, making it difficult to track the disease in a timely manner. Thus, timely disease tracking systems are needed to design and assess interventions to mitigate disease transmission.

Methodology/principal findings: We combined information from Zika-related Google searches, Twitter microblogs, and the HealthMap digital surveillance system with historical Zika suspected case counts to track and predict estimates of suspected weekly Zika cases during the 2015-2016 Latin American outbreak, up to three weeks ahead of the publication of official case data. We evaluated the predictive power of these data and used a dynamic multivariable approach to retrospectively produce predictions of weekly suspected cases for five countries: Colombia, El Salvador, Honduras, Venezuela, and Martinique. Models that combined Google (and Twitter data where available) with autoregressive information showed the best out-of-sample predictive accuracy for 1-week ahead predictions, whereas models that used only Google and Twitter typically performed best for 2- and 3-week ahead predictions.

Significance: Given the significant delay in the release of official government-reported Zika case counts, we show that these Internet-based data streams can be used as timely and complementary ways to assess the dynamics of the outbreak.

MeSH terms

  • Disease Outbreaks
  • Forecasting / methods*
  • Humans
  • Incidence
  • Latin America / epidemiology
  • Linear Models
  • Models, Statistical
  • Multivariate Analysis
  • Population Surveillance / methods*
  • Social Media / statistics & numerical data*
  • Zika Virus
  • Zika Virus Infection / epidemiology*

Grants and funding

The authors received no specific funding for this work.