Expanded base editing in rice and wheat using a Cas9-adenosine deaminase fusion

Genome Biol. 2018 May 29;19(1):59. doi: 10.1186/s13059-018-1443-z.

Abstract

Nucleotide base editors in plants have been limited to conversion of cytosine to thymine. Here, we describe a new plant adenine base editor based on an evolved tRNA adenosine deaminase fused to the nickase CRISPR/Cas9, enabling A•T to G•C conversion at frequencies up to 7.5% in protoplasts and 59.1% in regenerated rice and wheat plants. An endogenous gene is also successfully modified through introducing a gain-of-function point mutation to directly produce an herbicide-tolerant rice plant. With this new adenine base editing system, it is now possible to precisely edit all base pairs, thus expanding the toolset for precise editing in plants.

Keywords: Cas9-adenosine deaminase; Herbicide resistance; Rice; Wheat; sgRNA forms.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Deaminase / genetics*
  • Deoxyribonuclease I / genetics*
  • Gene Editing*
  • Gene Fusion
  • Oryza / genetics*
  • Triticum / genetics*

Substances

  • Deoxyribonuclease I
  • Adenosine Deaminase