Positive patches and negative noodles: linking RNA processing to transcription?

Trends Biochem Sci. 1993 Apr;18(4):117-9. doi: 10.1016/0968-0004(93)90016-g.

Abstract

A speculative model is presented that proposes specific mechanisms for effecting co-transcriptional splice site selection in pre-mRNAs. The model envisions that certain splicing factors containing arginine-rich, positively charged regions bind via these positive patches to the hyperphosphorylated, negatively charged tail of elongating RNA polymerase II. Thus tethered to the transcription machinery, these splicing factors gain access to signals in nascent transcripts as they emerge from the polymerase.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Models, Genetic*
  • Molecular Sequence Data
  • Peptide Fragments / chemistry
  • Peptide Fragments / metabolism
  • RNA Polymerase II / chemistry
  • RNA Polymerase II / metabolism*
  • RNA Precursors / metabolism*
  • RNA Splicing*
  • Repetitive Sequences, Nucleic Acid
  • Transcription, Genetic*

Substances

  • Peptide Fragments
  • RNA Precursors
  • RNA Polymerase II