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Table representation of search results timeline featuring number of search results per year.
Year | Number of Results |
---|---|
2018 | 2 |
2019 | 1 |
2020 | 1 |
2021 | 1 |
2022 | 1 |
2024 | 0 |
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Page 1
Opportunities and obstacles for deep learning in biology and medicine.
J R Soc Interface. 2018 Apr;15(141):20170387. doi: 10.1098/rsif.2017.0387.
J R Soc Interface. 2018.
PMID: 29618526
Free PMC article.
Review.
Ten quick tips for deep learning in biology.
Lee BD, Gitter A, Greene CS, Raschka S, Maguire F, Titus AJ, Kessler MD, Lee AJ, Chevrette MG, Stewart PA, Britto-Borges T, Cofer EM, Yu KH, Carmona JJ, Fertig EJ, Kalinin AA, Signal B, Lengerich BJ, Triche TJ Jr, Boca SM.
Lee BD, et al. Among authors: cofer em.
PLoS Comput Biol. 2022 Mar 24;18(3):e1009803. doi: 10.1371/journal.pcbi.1009803. eCollection 2022 Mar.
PLoS Comput Biol. 2022.
PMID: 35324884
Free PMC article.
No abstract available.
Item in Clipboard
Modeling transcriptional regulation of model species with deep learning.
Cofer EM, Raimundo J, Tadych A, Yamazaki Y, Wong AK, Theesfeld CL, Levine MS, Troyanskaya OG.
Cofer EM, et al.
Genome Res. 2021 Jun;31(6):1097-1105. doi: 10.1101/gr.266171.120. Epub 2021 Apr 22.
Genome Res. 2021.
PMID: 33888512
Free PMC article.
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Selene: a PyTorch-based deep learning library for sequence data.
Chen KM, Cofer EM, Zhou J, Troyanskaya OG.
Chen KM, et al. Among authors: cofer em.
Nat Methods. 2019 Apr;16(4):315-318. doi: 10.1038/s41592-019-0360-8. Epub 2019 Mar 28.
Nat Methods. 2019.
PMID: 30923381
Free PMC article.
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Aether: leveraging linear programming for optimal cloud computing in genomics.
Luber JM, Tierney BT, Cofer EM, Patel CJ, Kostic AD.
Luber JM, et al. Among authors: cofer em.
Bioinformatics. 2018 May 1;34(9):1565-1567. doi: 10.1093/bioinformatics/btx787.
Bioinformatics. 2018.
PMID: 29228186
Free PMC article.
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A systematic machine learning and data type comparison yields metagenomic predictors of infant age, sex, breastfeeding, antibiotic usage, country of origin, and delivery type.
Le Goallec A, Tierney BT, Luber JM, Cofer EM, Kostic AD, Patel CJ.
Le Goallec A, et al. Among authors: cofer em.
PLoS Comput Biol. 2020 May 11;16(5):e1007895. doi: 10.1371/journal.pcbi.1007895. eCollection 2020 May.
PLoS Comput Biol. 2020.
PMID: 32392251
Free PMC article.
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