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Page 1
Trusting the hand that feeds: microbes evolve to anticipate a serial transfer protocol as individuals or collectives.
BMC Evol Biol. 2019 Nov 4;19(1):201. doi: 10.1186/s12862-019-1512-2.
BMC Evol Biol. 2019.
PMID: 31684861
Free PMC article.
Evolution of evolvability and phenotypic plasticity in virtual cells.
Cuypers TD, Rutten JP, Hogeweg P.
Cuypers TD, et al.
BMC Evol Biol. 2017 Feb 28;17(1):60. doi: 10.1186/s12862-017-0918-y.
BMC Evol Biol. 2017.
PMID: 28241744
Free PMC article.
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A synergism between adaptive effects and evolvability drives whole genome duplication to fixation.
Cuypers TD, Hogeweg P.
Cuypers TD, et al.
PLoS Comput Biol. 2014 Apr 17;10(4):e1003547. doi: 10.1371/journal.pcbi.1003547. eCollection 2014 Apr.
PLoS Comput Biol. 2014.
PMID: 24743268
Free PMC article.
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Iterative orthology prediction uncovers new mitochondrial proteins and identifies C12orf62 as the human ortholog of COX14, a protein involved in the assembly of cytochrome c oxidase.
Szklarczyk R, Wanschers BF, Cuypers TD, Esseling JJ, Riemersma M, van den Brand MA, Gloerich J, Lasonder E, van den Heuvel LP, Nijtmans LG, Huynen MA.
Szklarczyk R, et al. Among authors: cuypers td.
Genome Biol. 2012 Feb 22;13(2):R12. doi: 10.1186/gb-2012-13-2-r12.
Genome Biol. 2012.
PMID: 22356826
Free PMC article.
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Virtual genomes in flux: an interplay of neutrality and adaptability explains genome expansion and streamlining.
Cuypers TD, Hogeweg P.
Cuypers TD, et al.
Genome Biol Evol. 2012;4(3):212-29. doi: 10.1093/gbe/evr141. Epub 2012 Jan 10.
Genome Biol Evol. 2012.
PMID: 22234601
Free PMC article.
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