Switchable DNA-Based Peroxidases Controlled by a Chaotropic Ion

Chembiochem. 2022 May 4;23(9):e202200090. doi: 10.1002/cbic.202200090. Epub 2022 Mar 23.

Abstract

Here we demonstrate a switchable DNA electron-transfer catalyst, enabled by selective destabilization of secondary structure by the denaturant, perchlorate. The system is comprised of two strands, one of which can be selectively switched between a G-quadruplex and duplex or single-stranded conformations. In the G-quadruplex state, it binds hemin, enabling peroxidase activity. This switching ability arises from our finding that perchlorate, a chaotropic Hofmeister ion, selectively destabilizes duplex over G-quadruplex DNA. By varying perchlorate concentration, we show that the DNA structure can be switched between states that do and do not catalyze electron-transfer catalysis. State switching can be achieved in three ways: thermally, by dilution, or by concentration.

Keywords: DNA; chaotropes; electron transfer; nanotechnology; synthetic biology.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • DNA
  • G-Quadruplexes*
  • Hemin
  • Perchlorates
  • Peroxidases*

Substances

  • Perchlorates
  • Hemin
  • DNA
  • Peroxidases