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1989 2
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1994 1
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2011 2
2012 1
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2019 1
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24 results

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Page 1
Genome sequence and evolution of Betula platyphylla.
Chen S, Wang Y, Yu L, Zheng T, Wang S, Yue Z, Jiang J, Kumari S, Zheng C, Tang H, Li J, Li Y, Chen J, Zhang W, Kuang H, Robertson JS, Zhao PX, Li H, Shu S, Yordanov YS, Huang H, Goodstein DM, Gai Y, Qi Q, Min J, Xu C, Wang S, Qu GZ, Paterson AH, Sankoff D, Wei H, Liu G, Yang C. Chen S, et al. Among authors: goodstein dm. Hortic Res. 2021 Feb 11;8(1):37. doi: 10.1038/s41438-021-00481-7. Hortic Res. 2021. PMID: 33574224 Free PMC article.
The genome of Eucalyptus grandis.
Myburg AA, Grattapaglia D, Tuskan GA, Hellsten U, Hayes RD, Grimwood J, Jenkins J, Lindquist E, Tice H, Bauer D, Goodstein DM, Dubchak I, Poliakov A, Mizrachi E, Kullan AR, Hussey SG, Pinard D, van der Merwe K, Singh P, van Jaarsveld I, Silva-Junior OB, Togawa RC, Pappas MR, Faria DA, Sansaloni CP, Petroli CD, Yang X, Ranjan P, Tschaplinski TJ, Ye CY, Li T, Sterck L, Vanneste K, Murat F, Soler M, Clemente HS, Saidi N, Cassan-Wang H, Dunand C, Hefer CA, Bornberg-Bauer E, Kersting AR, Vining K, Amarasinghe V, Ranik M, Naithani S, Elser J, Boyd AE, Liston A, Spatafora JW, Dharmwardhana P, Raja R, Sullivan C, Romanel E, Alves-Ferreira M, Külheim C, Foley W, Carocha V, Paiva J, Kudrna D, Brommonschenkel SH, Pasquali G, Byrne M, Rigault P, Tibbits J, Spokevicius A, Jones RC, Steane DA, Vaillancourt RE, Potts BM, Joubert F, Barry K, Pappas GJ, Strauss SH, Jaiswal P, Grima-Pettenati J, Salse J, Van de Peer Y, Rokhsar DS, Schmutz J. Myburg AA, et al. Among authors: goodstein dm. Nature. 2014 Jun 19;510(7505):356-62. doi: 10.1038/nature13308. Epub 2014 Jun 11. Nature. 2014. PMID: 24919147
The dynamic genome of Hydra.
Chapman JA, Kirkness EF, Simakov O, Hampson SE, Mitros T, Weinmaier T, Rattei T, Balasubramanian PG, Borman J, Busam D, Disbennett K, Pfannkoch C, Sumin N, Sutton GG, Viswanathan LD, Walenz B, Goodstein DM, Hellsten U, Kawashima T, Prochnik SE, Putnam NH, Shu S, Blumberg B, Dana CE, Gee L, Kibler DF, Law L, Lindgens D, Martinez DE, Peng J, Wigge PA, Bertulat B, Guder C, Nakamura Y, Ozbek S, Watanabe H, Khalturin K, Hemmrich G, Franke A, Augustin R, Fraune S, Hayakawa E, Hayakawa S, Hirose M, Hwang JS, Ikeo K, Nishimiya-Fujisawa C, Ogura A, Takahashi T, Steinmetz PR, Zhang X, Aufschnaiter R, Eder MK, Gorny AK, Salvenmoser W, Heimberg AM, Wheeler BM, Peterson KJ, Böttger A, Tischler P, Wolf A, Gojobori T, Remington KA, Strausberg RL, Venter JC, Technau U, Hobmayer B, Bosch TC, Holstein TW, Fujisawa T, Bode HR, David CN, Rokhsar DS, Steele RE. Chapman JA, et al. Among authors: goodstein dm. Nature. 2010 Mar 25;464(7288):592-6. doi: 10.1038/nature08830. Epub 2010 Mar 14. Nature. 2010. PMID: 20228792 Free PMC article.
Multiple origins, one evolutionary trajectory: gradual evolution characterizes distinct lineages of allotetraploid Brachypodium.
Scarlett VT, Lovell JT, Shao M, Phillips J, Shu S, Lusinska J, Goodstein DM, Jenkins J, Grimwood J, Barry K, Chalhoub B, Schmutz J, Hasterok R, Catalán P, Vogel JP. Scarlett VT, et al. Among authors: goodstein dm. Genetics. 2023 Feb 9;223(2):iyac146. doi: 10.1093/genetics/iyac146. Genetics. 2023. PMID: 36218464 Free PMC article.
The reference genome and abiotic stress responses of the model perennial grass Brachypodium sylvaticum.
Lei L, Gordon SP, Liu L, Sade N, Lovell JT, Rubio Wilhelmi MDM, Singan V, Sreedasyam A, Hestrin R, Phillips J, Hernandez BT, Barry K, Shu S, Jenkins J, Schmutz J, Goodstein DM, Thilmony R, Blumwald E, Vogel JP. Lei L, et al. Among authors: goodstein dm. G3 (Bethesda). 2023 Dec 29;14(1):jkad245. doi: 10.1093/g3journal/jkad245. G3 (Bethesda). 2023. PMID: 37883711 Free PMC article.
Construction and comparison of three reference-quality genome assemblies for soybean.
Valliyodan B, Cannon SB, Bayer PE, Shu S, Brown AV, Ren L, Jenkins J, Chung CY, Chan TF, Daum CG, Plott C, Hastie A, Baruch K, Barry KW, Huang W, Patil G, Varshney RK, Hu H, Batley J, Yuan Y, Song Q, Stupar RM, Goodstein DM, Stacey G, Lam HM, Jackson SA, Schmutz J, Grimwood J, Edwards D, Nguyen HT. Valliyodan B, et al. Among authors: goodstein dm. Plant J. 2019 Dec;100(5):1066-1082. doi: 10.1111/tpj.14500. Epub 2019 Oct 28. Plant J. 2019. PMID: 31433882 Free article.
JBrowse: a dynamic web platform for genome visualization and analysis.
Buels R, Yao E, Diesh CM, Hayes RD, Munoz-Torres M, Helt G, Goodstein DM, Elsik CG, Lewis SE, Stein L, Holmes IH. Buels R, et al. Among authors: goodstein dm. Genome Biol. 2016 Apr 12;17:66. doi: 10.1186/s13059-016-0924-1. Genome Biol. 2016. PMID: 27072794 Free PMC article.
The Chlamydomonas Genome Project, version 6: Reference assemblies for mating-type plus and minus strains reveal extensive structural mutation in the laboratory.
Craig RJ, Gallaher SD, Shu S, Salomé PA, Jenkins JW, Blaby-Haas CE, Purvine SO, O'Donnell S, Barry K, Grimwood J, Strenkert D, Kropat J, Daum C, Yoshinaga Y, Goodstein DM, Vallon O, Schmutz J, Merchant SS. Craig RJ, et al. Among authors: goodstein dm. Plant Cell. 2023 Feb 20;35(2):644-672. doi: 10.1093/plcell/koac347. Plant Cell. 2023. PMID: 36562730 Free PMC article.
Phytozome: a comparative platform for green plant genomics.
Goodstein DM, Shu S, Howson R, Neupane R, Hayes RD, Fazo J, Mitros T, Dirks W, Hellsten U, Putnam N, Rokhsar DS. Goodstein DM, et al. Nucleic Acids Res. 2012 Jan;40(Database issue):D1178-86. doi: 10.1093/nar/gkr944. Epub 2011 Nov 22. Nucleic Acids Res. 2012. PMID: 22110026 Free PMC article.
24 results