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GalaxyCloudRunner: enhancing scalable computing for Galaxy.
Goonasekera N, Mahmoud A, Chilton J, Afgan E. Goonasekera N, et al. Bioinformatics. 2021 Jul 19;37(12):1763-1765. doi: 10.1093/bioinformatics/btaa860. Bioinformatics. 2021. PMID: 33104194 Free PMC article.
Federated Galaxy: Biomedical Computing at the Frontier.
Afgan E, Jalili V, Goonasekera N, Taylor J, Goecks J. Afgan E, et al. Among authors: goonasekera n. IEEE Int Conf Cloud Comput. 2018 Jul;2018:10.1109/cloud.2018.00124. doi: 10.1109/cloud.2018.00124. Epub 2018 Sep 10. IEEE Int Conf Cloud Comput. 2018. PMID: 34386295 Free PMC article.
CloudLaunch: Discover and Deploy Cloud Applications.
Afgan E, Lonie A, Taylor J, Goonasekera N. Afgan E, et al. Among authors: goonasekera n. Future Gener Comput Syst. 2019 May;94:802-810. doi: 10.1016/j.future.2018.04.037. Epub 2018 Jun 15. Future Gener Comput Syst. 2019. PMID: 34366521 Free PMC article.
BioBlend: automating pipeline analyses within Galaxy and CloudMan.
Sloggett C, Goonasekera N, Afgan E. Sloggett C, et al. Among authors: goonasekera n. Bioinformatics. 2013 Jul 1;29(13):1685-6. doi: 10.1093/bioinformatics/btt199. Epub 2013 Apr 28. Bioinformatics. 2013. PMID: 23630176 Free PMC article.
Genomics Virtual Laboratory: A Practical Bioinformatics Workbench for the Cloud.
Afgan E, Sloggett C, Goonasekera N, Makunin I, Benson D, Crowe M, Gladman S, Kowsar Y, Pheasant M, Horst R, Lonie A. Afgan E, et al. Among authors: goonasekera n. PLoS One. 2015 Oct 26;10(10):e0140829. doi: 10.1371/journal.pone.0140829. eCollection 2015. PLoS One. 2015. PMID: 26501966 Free PMC article.
CloudBridge: a Simple Cross-Cloud Python Library.
Goonasekera N, Lonie A, Taylor J, Afgan E. Goonasekera N, et al. Proc XSEDE16 (2016). 2016 Jul;2016:37. doi: 10.1145/2949550.2949648. Epub 2016 Jul 17. Proc XSEDE16 (2016). 2016. PMID: 34423340 Free PMC article.