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GREENC: a Wiki-based database of plant lncRNAs.
Paytuví Gallart A, Hermoso Pulido A, Anzar Martínez de Lagrán I, Sanseverino W, Aiese Cigliano R. Paytuví Gallart A, et al. Among authors: hermoso pulido a. Nucleic Acids Res. 2016 Jan 4;44(D1):D1161-6. doi: 10.1093/nar/gkv1215. Epub 2015 Nov 17. Nucleic Acids Res. 2016. PMID: 26578586 Free PMC article.
ExOrthist: a tool to infer exon orthologies at any evolutionary distance.
Márquez Y, Mantica F, Cozzuto L, Burguera D, Hermoso-Pulido A, Ponomarenko J, Roy SW, Irimia M. Márquez Y, et al. Among authors: hermoso pulido a. Genome Biol. 2021 Aug 20;22(1):239. doi: 10.1186/s13059-021-02441-9. Genome Biol. 2021. PMID: 34416914 Free PMC article.
Whole genome sequencing of turbot (Scophthalmus maximus; Pleuronectiformes): a fish adapted to demersal life.
Figueras A, Robledo D, Corvelo A, Hermida M, Pereiro P, Rubiolo JA, Gómez-Garrido J, Carreté L, Bello X, Gut M, Gut IG, Marcet-Houben M, Forn-Cuní G, Galán B, García JL, Abal-Fabeiro JL, Pardo BG, Taboada X, Fernández C, Vlasova A, Hermoso-Pulido A, Guigó R, Álvarez-Dios JA, Gómez-Tato A, Viñas A, Maside X, Gabaldón T, Novoa B, Bouza C, Alioto T, Martínez P. Figueras A, et al. Among authors: hermoso pulido a. DNA Res. 2016 Jun;23(3):181-92. doi: 10.1093/dnares/dsw007. Epub 2016 Mar 6. DNA Res. 2016. PMID: 26951068 Free PMC article.
An atlas of alternative splicing profiles and functional associations reveals new regulatory programs and genes that simultaneously express multiple major isoforms.
Tapial J, Ha KCH, Sterne-Weiler T, Gohr A, Braunschweig U, Hermoso-Pulido A, Quesnel-Vallières M, Permanyer J, Sodaei R, Marquez Y, Cozzuto L, Wang X, Gómez-Velázquez M, Rayon T, Manzanares M, Ponomarenko J, Blencowe BJ, Irimia M. Tapial J, et al. Among authors: hermoso pulido a. Genome Res. 2017 Oct;27(10):1759-1768. doi: 10.1101/gr.220962.117. Epub 2017 Aug 30. Genome Res. 2017. PMID: 28855263 Free PMC article.