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Page 1
Markov state models provide insights into dynamic modulation of protein function.
Acc Chem Res. 2015 Feb 17;48(2):414-22. doi: 10.1021/ar5002999. Epub 2015 Jan 3.
Acc Chem Res. 2015.
PMID: 25625937
Free PMC article.
Review.
MSMBuilder: Statistical Models for Biomolecular Dynamics.
Harrigan MP, Sultan MM, Hernández CX, Husic BE, Eastman P, Schwantes CR, Beauchamp KA, McGibbon RT, Pande VS.
Harrigan MP, et al. Among authors: hernandez cx.
Biophys J. 2017 Jan 10;112(1):10-15. doi: 10.1016/j.bpj.2016.10.042.
Biophys J. 2017.
PMID: 28076801
Free PMC article.
Item in Clipboard
Variational encoding of complex dynamics.
Hernández CX, Wayment-Steele HK, Sultan MM, Husic BE, Pande VS.
Hernández CX, et al.
Phys Rev E. 2018 Jun;97(6-1):062412. doi: 10.1103/PhysRevE.97.062412.
Phys Rev E. 2018.
PMID: 30011547
Free PMC article.
Item in Clipboard
MDTraj: A Modern Open Library for the Analysis of Molecular Dynamics Trajectories.
McGibbon RT, Beauchamp KA, Harrigan MP, Klein C, Swails JM, Hernández CX, Schwantes CR, Wang LP, Lane TJ, Pande VS.
McGibbon RT, et al. Among authors: hernandez cx.
Biophys J. 2015 Oct 20;109(8):1528-32. doi: 10.1016/j.bpj.2015.08.015.
Biophys J. 2015.
PMID: 26488642
Free PMC article.
Item in Clipboard
Structure-based network analysis of an evolved G protein-coupled receptor homodimer interface.
Nichols SE, Hernández CX, Wang Y, McCammon JA.
Nichols SE, et al. Among authors: hernandez cx.
Protein Sci. 2013 Jun;22(6):745-54. doi: 10.1002/pro.2258. Epub 2013 May 8.
Protein Sci. 2013.
PMID: 23553730
Free PMC article.
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