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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2001 3
2002 1
2003 4
2006 2
2007 1
2010 1
2017 2
2018 1
2019 1
2020 2
2021 1
2023 2
2024 1

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21 results

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Page 1
A Deep Learning Approach to Antibiotic Discovery.
Stokes JM, Yang K, Swanson K, Jin W, Cubillos-Ruiz A, Donghia NM, MacNair CR, French S, Carfrae LA, Bloom-Ackermann Z, Tran VM, Chiappino-Pepe A, Badran AH, Andrews IW, Chory EJ, Church GM, Brown ED, Jaakkola TS, Barzilay R, Collins JJ. Stokes JM, et al. Among authors: jaakkola ts. Cell. 2020 Feb 20;180(4):688-702.e13. doi: 10.1016/j.cell.2020.01.021. Cell. 2020. PMID: 32084340 Free PMC article.
De novo design of protein structure and function with RFdiffusion.
Watson JL, Juergens D, Bennett NR, Trippe BL, Yim J, Eisenach HE, Ahern W, Borst AJ, Ragotte RJ, Milles LF, Wicky BIM, Hanikel N, Pellock SJ, Courbet A, Sheffler W, Wang J, Venkatesh P, Sappington I, Torres SV, Lauko A, De Bortoli V, Mathieu E, Ovchinnikov S, Barzilay R, Jaakkola TS, DiMaio F, Baek M, Baker D. Watson JL, et al. Among authors: jaakkola ts. Nature. 2023 Aug;620(7976):1089-1100. doi: 10.1038/s41586-023-06415-8. Epub 2023 Jul 11. Nature. 2023. PMID: 37433327 Free PMC article.
A Deep Learning Approach to Antibiotic Discovery.
Stokes JM, Yang K, Swanson K, Jin W, Cubillos-Ruiz A, Donghia NM, MacNair CR, French S, Carfrae LA, Bloom-Ackermann Z, Tran VM, Chiappino-Pepe A, Badran AH, Andrews IW, Chory EJ, Church GM, Brown ED, Jaakkola TS, Barzilay R, Collins JJ. Stokes JM, et al. Among authors: jaakkola ts. Cell. 2020 Apr 16;181(2):475-483. doi: 10.1016/j.cell.2020.04.001. Cell. 2020. PMID: 32302574 Free article. No abstract available.
Improved motif-scaffolding with SE(3) flow matching.
Yim J, Campbell A, Mathieu E, Foong AYK, Gastegger M, Jiménez-Luna J, Lewis S, Satorras VG, Veeling BS, Noé F, Barzilay R, Jaakkola TS. Yim J, et al. Among authors: jaakkola ts. ArXiv [Preprint]. 2024 Jan 8:arXiv:2401.04082v1. ArXiv. 2024. PMID: 38259348 Free PMC article. Preprint.
Autonomous, multiproperty-driven molecular discovery: From predictions to measurements and back.
Koscher BA, Canty RB, McDonald MA, Greenman KP, McGill CJ, Bilodeau CL, Jin W, Wu H, Vermeire FH, Jin B, Hart T, Kulesza T, Li SC, Jaakkola TS, Barzilay R, Gómez-Bombarelli R, Green WH, Jensen KF. Koscher BA, et al. Among authors: jaakkola ts. Science. 2023 Dec 22;382(6677):eadi1407. doi: 10.1126/science.adi1407. Epub 2023 Dec 22. Science. 2023. PMID: 38127734
Deep learning identifies synergistic drug combinations for treating COVID-19.
Jin W, Stokes JM, Eastman RT, Itkin Z, Zakharov AV, Collins JJ, Jaakkola TS, Barzilay R. Jin W, et al. Among authors: jaakkola ts. Proc Natl Acad Sci U S A. 2021 Sep 28;118(39):e2105070118. doi: 10.1073/pnas.2105070118. Proc Natl Acad Sci U S A. 2021. PMID: 34526388 Free PMC article.
Prediction of Organic Reaction Outcomes Using Machine Learning.
Coley CW, Barzilay R, Jaakkola TS, Green WH, Jensen KF. Coley CW, et al. Among authors: jaakkola ts. ACS Cent Sci. 2017 May 24;3(5):434-443. doi: 10.1021/acscentsci.7b00064. Epub 2017 Apr 18. ACS Cent Sci. 2017. PMID: 28573205 Free PMC article.
Discovering homotypic binding events at high spatial resolution.
Guo Y, Papachristoudis G, Altshuler RC, Gerber GK, Jaakkola TS, Gifford DK, Mahony S. Guo Y, et al. Among authors: jaakkola ts. Bioinformatics. 2010 Dec 15;26(24):3028-34. doi: 10.1093/bioinformatics/btq590. Epub 2010 Oct 21. Bioinformatics. 2010. PMID: 20966006 Free PMC article.
21 results