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Year | Number of Results |
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2014 | 2 |
2020 | 1 |
2021 | 1 |
2022 | 2 |
2024 | 0 |
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Page 1
Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network.
Nat Commun. 2021 Jun 2;12(1):3297. doi: 10.1038/s41467-021-23143-7.
Nat Commun. 2021.
PMID: 34078885
Free PMC article.
Author Correction: Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network.
Grapotte M, Saraswat M, Bessière C, Menichelli C, Ramilowski JA, Severin J, Hayashizaki Y, Itoh M, Tagami M, Murata M, Kojima-Ishiyama M, Noma S, Noguchi S, Kasukawa T, Hasegawa A, Suzuki H, Nishiyori-Sueki H, Frith MC; FANTOM consortium; Chatelain C, Carninci P, de Hoon MJL, Wasserman WW, Bréhélin L, Lecellier CH.
Grapotte M, et al. Among authors: kojima ishiyama m.
Nat Commun. 2022 Mar 1;13(1):1200. doi: 10.1038/s41467-022-28758-y.
Nat Commun. 2022.
PMID: 35232988
Free PMC article.
No abstract available.
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Detecting expressed genes using CAGE.
Murata M, Nishiyori-Sueki H, Kojima-Ishiyama M, Carninci P, Hayashizaki Y, Itoh M.
Murata M, et al. Among authors: kojima ishiyama m.
Methods Mol Biol. 2014;1164:67-85. doi: 10.1007/978-1-4939-0805-9_7.
Methods Mol Biol. 2014.
PMID: 24927836
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High quality genome assembly of the anhydrobiotic midge provides insights on a single chromosome-based emergence of extreme desiccation tolerance.
Yoshida Y, Shaikhutdinov N, Kozlova O, Itoh M, Tagami M, Murata M, Nishiyori-Sueki H, Kojima-Ishiyama M, Noma S, Cherkasov A, Gazizova G, Nasibullina A, Deviatiiarov R, Shagimardanova E, Ryabova A, Yamaguchi K, Bino T, Shigenobu S, Tokumoto S, Miyata Y, Cornette R, Yamada TG, Funahashi A, Tomita M, Gusev O, Kikawada T.
Yoshida Y, et al. Among authors: kojima ishiyama m.
NAR Genom Bioinform. 2022 Apr 5;4(2):lqac029. doi: 10.1093/nargab/lqac029. eCollection 2022 Jun.
NAR Genom Bioinform. 2022.
PMID: 35387384
Free PMC article.
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Cap Analysis of Gene Expression (CAGE): A Quantitative and Genome-Wide Assay of Transcription Start Sites.
Morioka MS, Kawaji H, Nishiyori-Sueki H, Murata M, Kojima-Ishiyama M, Carninci P, Itoh M.
Morioka MS, et al. Among authors: kojima ishiyama m.
Methods Mol Biol. 2020;2120:277-301. doi: 10.1007/978-1-0716-0327-7_20.
Methods Mol Biol. 2020.
PMID: 32124327
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Comparison of CAGE and RNA-seq transcriptome profiling using clonally amplified and single-molecule next-generation sequencing.
Kawaji H, Lizio M, Itoh M, Kanamori-Katayama M, Kaiho A, Nishiyori-Sueki H, Shin JW, Kojima-Ishiyama M, Kawano M, Murata M, Ninomiya-Fukuda N, Ishikawa-Kato S, Nagao-Sato S, Noma S, Hayashizaki Y, Forrest AR, Carninci P; FANTOM Consortium.
Kawaji H, et al. Among authors: kojima ishiyama m.
Genome Res. 2014 Apr;24(4):708-17. doi: 10.1101/gr.156232.113. Epub 2014 Mar 27.
Genome Res. 2014.
PMID: 24676093
Free PMC article.
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