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Evaluation of tools for long read RNA-seq splice-aware alignment.
Bioinformatics. 2018 Mar 1;34(5):748-754. doi: 10.1093/bioinformatics/btx668.
Bioinformatics. 2018.
PMID: 29069314
Free PMC article.
Comparative analysis of metagenomic classifiers for long-read sequencing datasets.
Marić J, Križanović K, Riondet S, Nagarajan N, Šikić M.
Marić J, et al. Among authors: krizanovic k.
BMC Bioinformatics. 2024 Jan 11;25(1):15. doi: 10.1186/s12859-024-05634-8.
BMC Bioinformatics. 2024.
PMID: 38212694
Free PMC article.
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Towards the Investigation of the Adaptive Divergence in a Species of Exceptional Ecological Plasticity: Chromosome-Scale Genome Assembly of Chouardia litardierei (Hyacinthaceae).
Radosavljević I, Križanović K, Šarančić SL, Jakše J.
Radosavljević I, et al. Among authors: krizanovic k.
Int J Mol Sci. 2023 Jun 28;24(13):10755. doi: 10.3390/ijms241310755.
Int J Mol Sci. 2023.
PMID: 37445933
Free PMC article.
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Evaluation of hybrid and non-hybrid methods for de novo assembly of nanopore reads.
Sović I, Križanović K, Skala K, Šikić M.
Sović I, et al. Among authors: krizanovic k.
Bioinformatics. 2016 Sep 1;32(17):2582-9. doi: 10.1093/bioinformatics/btw237. Epub 2016 May 9.
Bioinformatics. 2016.
PMID: 27162186
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