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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2009 2
2010 4
2011 2
2012 4
2013 2
2014 2
2015 5
2016 5
2017 4
2018 4
2019 8
2020 5
2021 8
2022 6
2023 13
2024 5

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76 results

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Page 1
Metagenome analysis using the Kraken software suite.
Lu J, Rincon N, Wood DE, Breitwieser FP, Pockrandt C, Langmead B, Salzberg SL, Steinegger M. Lu J, et al. Among authors: langmead b. Nat Protoc. 2022 Dec;17(12):2815-2839. doi: 10.1038/s41596-022-00738-y. Epub 2022 Sep 28. Nat Protoc. 2022. PMID: 36171387 Free PMC article. Review.
Fast gapped-read alignment with Bowtie 2.
Langmead B, Salzberg SL. Langmead B, et al. Nat Methods. 2012 Mar 4;9(4):357-9. doi: 10.1038/nmeth.1923. Nat Methods. 2012. PMID: 22388286 Free PMC article.
HISAT: a fast spliced aligner with low memory requirements.
Kim D, Langmead B, Salzberg SL. Kim D, et al. Among authors: langmead b. Nat Methods. 2015 Apr;12(4):357-60. doi: 10.1038/nmeth.3317. Epub 2015 Mar 9. Nat Methods. 2015. PMID: 25751142 Free PMC article.
Alignment of Next-Generation Sequencing Reads.
Reinert K, Langmead B, Weese D, Evers DJ. Reinert K, et al. Among authors: langmead b. Annu Rev Genomics Hum Genet. 2015;16:133-51. doi: 10.1146/annurev-genom-090413-025358. Epub 2015 May 4. Annu Rev Genomics Hum Genet. 2015. PMID: 25939052 Review.
Cell-specific regulation of gene expression using splicing-dependent frameshifting.
Ling JP, Bygrave AM, Santiago CP, Carmen-Orozco RP, Trinh VT, Yu M, Li Y, Liu Y, Bowden KD, Duncan LH, Han J, Taneja K, Dongmo R, Babola TA, Parker P, Jiang L, Leavey PJ, Smith JJ, Vistein R, Gimmen MY, Dubner B, Helmenstine E, Teodorescu P, Karantanos T, Ghiaur G, Kanold PO, Bergles D, Langmead B, Sun S, Nielsen KJ, Peachey N, Singh MS, Dalton WB, Rajaii F, Huganir RL, Blackshaw S. Ling JP, et al. Among authors: langmead b. Nat Commun. 2022 Oct 1;13(1):5773. doi: 10.1038/s41467-022-33523-2. Nat Commun. 2022. PMID: 36182931 Free PMC article.
Pangenomic genotyping with the marker array.
Mun T, Vaddadi NSK, Langmead B. Mun T, et al. Among authors: langmead b. Algorithms Mol Biol. 2023 May 5;18(1):2. doi: 10.1186/s13015-023-00225-3. Algorithms Mol Biol. 2023. PMID: 37147657 Free PMC article.
Finding Maximal Exact Matches Using the r-Index.
Rossi M, Oliva M, Bonizzoni P, Langmead B, Gagie T, Boucher C. Rossi M, et al. Among authors: langmead b. J Comput Biol. 2022 Feb;29(2):188-194. doi: 10.1089/cmb.2021.0445. Epub 2022 Jan 17. J Comput Biol. 2022. PMID: 35041518 Free PMC article.
76 results