Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Results by year

Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2005 2
2006 2
2007 3
2008 1
2009 2
2010 4
2011 8
2012 7
2013 6
2014 7
2015 10
2016 9
2017 5
2018 5
2019 3
2020 3
2021 3
2022 2
2023 4
2024 0

Text availability

Article attribute

Article type

Publication date

Search Results

77 results

Results by year

Filters applied: . Clear all
Page 1
Recounting the FANTOM CAGE-Associated Transcriptome.
Imada EL, Sanchez DF, Collado-Torres L, Wilks C, Matam T, Dinalankara W, Stupnikov A, Lobo-Pereira F, Yip CW, Yasuzawa K, Kondo N, Itoh M, Suzuki H, Kasukawa T, Hon CC, de Hoon MJL, Shin JW, Carninci P, Jaffe AE, Leek JT, Favorov A, Franco GR, Langmead B, Marchionni L. Imada EL, et al. Among authors: leek jt. Genome Res. 2020 Jul;30(7):1073-1081. doi: 10.1101/gr.254656.119. Epub 2020 Feb 20. Genome Res. 2020. PMID: 32079618 Free PMC article.
Reproducible RNA-seq analysis using recount2.
Collado-Torres L, Nellore A, Kammers K, Ellis SE, Taub MA, Hansen KD, Jaffe AE, Langmead B, Leek JT. Collado-Torres L, et al. Among authors: leek jt. Nat Biotechnol. 2017 Apr 11;35(4):319-321. doi: 10.1038/nbt.3838. Nat Biotechnol. 2017. PMID: 28398307 Free PMC article. No abstract available.
Transparency and reproducibility in artificial intelligence.
Haibe-Kains B, Adam GA, Hosny A, Khodakarami F; Massive Analysis Quality Control (MAQC) Society Board of Directors; Waldron L, Wang B, McIntosh C, Goldenberg A, Kundaje A, Greene CS, Broderick T, Hoffman MM, Leek JT, Korthauer K, Huber W, Brazma A, Pineau J, Tibshirani R, Hastie T, Ioannidis JPA, Quackenbush J, Aerts HJWL. Haibe-Kains B, et al. Among authors: leek jt. Nature. 2020 Oct;586(7829):E14-E16. doi: 10.1038/s41586-020-2766-y. Epub 2020 Oct 14. Nature. 2020. PMID: 33057217 Free PMC article.
How to share data for collaboration.
Ellis SE, Leek JT. Ellis SE, et al. Among authors: leek jt. Am Stat. 2018;72(1):53-57. doi: 10.1080/00031305.2017.1375987. Epub 2018 Apr 24. Am Stat. 2018. PMID: 32981941 Free PMC article.
Statistics. What is the question?
Leek JT, Peng RD. Leek JT, et al. Science. 2015 Mar 20;347(6228):1314-5. doi: 10.1126/science.aaa6146. Epub 2015 Feb 26. Science. 2015. PMID: 25721505 No abstract available.
Open-source Tools for Training Resources - OTTR.
Savonen C, Wright C, Hoffman AM, Muschelli J, Cox K, Tan FJ, Leek JT. Savonen C, et al. Among authors: leek jt. J Stat Data Sci Educ. 2023;31(1):57-65. doi: 10.1080/26939169.2022.2118646. Epub 2022 Oct 31. J Stat Data Sci Educ. 2023. PMID: 37207236 Free PMC article.
recount3: summaries and queries for large-scale RNA-seq expression and splicing.
Wilks C, Zheng SC, Chen FY, Charles R, Solomon B, Ling JP, Imada EL, Zhang D, Joseph L, Leek JT, Jaffe AE, Nellore A, Collado-Torres L, Hansen KD, Langmead B. Wilks C, et al. Among authors: leek jt. Genome Biol. 2021 Nov 29;22(1):323. doi: 10.1186/s13059-021-02533-6. Genome Biol. 2021. PMID: 34844637 Free PMC article.
77 results