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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2000 1
2001 1
2004 1
2007 3
2010 3
2012 2
2013 3
2014 1
2015 3
2018 2
2019 2
2020 2
2021 3
2023 1
2024 0

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28 results

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Page 1
The EcoCyc Database.
Karp PD, Ong WK, Paley S, Billington R, Caspi R, Fulcher C, Kothari A, Krummenacker M, Latendresse M, Midford PE, Subhraveti P, Gama-Castro S, Muñiz-Rascado L, Bonavides-Martinez C, Santos-Zavaleta A, Mackie A, Collado-Vides J, Keseler IM, Paulsen I. Karp PD, et al. Among authors: midford pe. EcoSal Plus. 2018 Nov;8(1):10.1128/ecosalplus.ESP-0006-2018. doi: 10.1128/ecosalplus.ESP-0006-2018. EcoSal Plus. 2018. PMID: 30406744 Free PMC article. Review.
The EcoCyc Database (2023).
Karp PD, Paley S, Caspi R, Kothari A, Krummenacker M, Midford PE, Moore LR, Subhraveti P, Gama-Castro S, Tierrafria VH, Lara P, Muñiz-Rascado L, Bonavides-Martinez C, Santos-Zavaleta A, Mackie A, Sun G, Ahn-Horst TA, Choi H, Covert MW, Collado-Vides J, Paulsen I. Karp PD, et al. Among authors: midford pe. EcoSal Plus. 2023 Dec 12;11(1):eesp00022023. doi: 10.1128/ecosalplus.esp-0002-2023. Epub 2023 May 11. EcoSal Plus. 2023. PMID: 37220074 Free article. Review.
The EcoCyc Database in 2021.
Keseler IM, Gama-Castro S, Mackie A, Billington R, Bonavides-Martínez C, Caspi R, Kothari A, Krummenacker M, Midford PE, Muñiz-Rascado L, Ong WK, Paley S, Santos-Zavaleta A, Subhraveti P, Tierrafría VH, Wolfe AJ, Collado-Vides J, Paulsen IT, Karp PD. Keseler IM, et al. Among authors: midford pe. Front Microbiol. 2021 Jul 28;12:711077. doi: 10.3389/fmicb.2021.711077. eCollection 2021. Front Microbiol. 2021. PMID: 34394059 Free PMC article.
Finding our way through phenotypes.
Deans AR, Lewis SE, Huala E, Anzaldo SS, Ashburner M, Balhoff JP, Blackburn DC, Blake JA, Burleigh JG, Chanet B, Cooper LD, Courtot M, Csösz S, Cui H, Dahdul W, Das S, Dececchi TA, Dettai A, Diogo R, Druzinsky RE, Dumontier M, Franz NM, Friedrich F, Gkoutos GV, Haendel M, Harmon LJ, Hayamizu TF, He Y, Hines HM, Ibrahim N, Jackson LM, Jaiswal P, James-Zorn C, Köhler S, Lecointre G, Lapp H, Lawrence CJ, Le Novère N, Lundberg JG, Macklin J, Mast AR, Midford PE, Mikó I, Mungall CJ, Oellrich A, Osumi-Sutherland D, Parkinson H, Ramírez MJ, Richter S, Robinson PN, Ruttenberg A, Schulz KS, Segerdell E, Seltmann KC, Sharkey MJ, Smith AD, Smith B, Specht CD, Squires RB, Thacker RW, Thessen A, Fernandez-Triana J, Vihinen M, Vize PD, Vogt L, Wall CE, Walls RL, Westerfeld M, Wharton RA, Wirkner CS, Woolley JB, Yoder MJ, Zorn AM, Mabee P. Deans AR, et al. Among authors: midford pe. PLoS Biol. 2015 Jan 6;13(1):e1002033. doi: 10.1371/journal.pbio.1002033. eCollection 2015 Jan. PLoS Biol. 2015. PMID: 25562316 Free PMC article.
The MetaCyc database of metabolic pathways and enzymes.
Caspi R, Billington R, Fulcher CA, Keseler IM, Kothari A, Krummenacker M, Latendresse M, Midford PE, Ong Q, Ong WK, Paley S, Subhraveti P, Karp PD. Caspi R, et al. Among authors: midford pe. Nucleic Acids Res. 2018 Jan 4;46(D1):D633-D639. doi: 10.1093/nar/gkx935. Nucleic Acids Res. 2018. PMID: 29059334 Free PMC article.
The BioCyc collection of microbial genomes and metabolic pathways.
Karp PD, Billington R, Caspi R, Fulcher CA, Latendresse M, Kothari A, Keseler IM, Krummenacker M, Midford PE, Ong Q, Ong WK, Paley SM, Subhraveti P. Karp PD, et al. Among authors: midford pe. Brief Bioinform. 2019 Jul 19;20(4):1085-1093. doi: 10.1093/bib/bbx085. Brief Bioinform. 2019. PMID: 29447345 Free PMC article.
The MetaCyc database of metabolic pathways and enzymes - a 2019 update.
Caspi R, Billington R, Keseler IM, Kothari A, Krummenacker M, Midford PE, Ong WK, Paley S, Subhraveti P, Karp PD. Caspi R, et al. Among authors: midford pe. Nucleic Acids Res. 2020 Jan 8;48(D1):D445-D453. doi: 10.1093/nar/gkz862. Nucleic Acids Res. 2020. PMID: 31586394 Free PMC article.
Emerging semantics to link phenotype and environment.
Thessen AE, Bunker DE, Buttigieg PL, Cooper LD, Dahdul WM, Domisch S, Franz NM, Jaiswal P, Lawrence-Dill CJ, Midford PE, Mungall CJ, Ramírez MJ, Specht CD, Vogt L, Vos RA, Walls RL, White JW, Zhang G, Deans AR, Huala E, Lewis SE, Mabee PM. Thessen AE, et al. Among authors: midford pe. PeerJ. 2015 Dec 14;3:e1470. doi: 10.7717/peerj.1470. eCollection 2015. PeerJ. 2015. PMID: 26713234 Free PMC article.
28 results