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2020 2
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Page 1
Megaphylogeny resolves global patterns of mushroom evolution.
Varga T, Krizsán K, Földi C, Dima B, Sánchez-García M, Sánchez-Ramírez S, Szöllősi GJ, Szarkándi JG, Papp V, Albert L, Andreopoulos W, Angelini C, Antonín V, Barry KW, Bougher NL, Buchanan P, Buyck B, Bense V, Catcheside P, Chovatia M, Cooper J, Dämon W, Desjardin D, Finy P, Geml J, Haridas S, Hughes K, Justo A, Karasiński D, Kautmanova I, Kiss B, Kocsubé S, Kotiranta H, LaButti KM, Lechner BE, Liimatainen K, Lipzen A, Lukács Z, Mihaltcheva S, Morgado LN, Niskanen T, Noordeloos ME, Ohm RA, Ortiz-Santana B, Ovrebo C, Rácz N, Riley R, Savchenko A, Shiryaev A, Soop K, Spirin V, Szebenyi C, Tomšovský M, Tulloss RE, Uehling J, Grigoriev IV, Vágvölgyi C, Papp T, Martin FM, Miettinen O, Hibbett DS, Nagy LG. Varga T, et al. Among authors: mihaltcheva s. Nat Ecol Evol. 2019 Apr;3(4):668-678. doi: 10.1038/s41559-019-0834-1. Epub 2019 Mar 18. Nat Ecol Evol. 2019. PMID: 30886374 Free PMC article.
A multi-omic characterization of temperature stress in a halotolerant Scenedesmus strain for algal biotechnology.
Calhoun S, Bell TAS, Dahlin LR, Kunde Y, LaButti K, Louie KB, Kuftin A, Treen D, Dilworth D, Mihaltcheva S, Daum C, Bowen BP, Northen TR, Guarnieri MT, Starkenburg SR, Grigoriev IV. Calhoun S, et al. Among authors: mihaltcheva s. Commun Biol. 2021 Mar 12;4(1):333. doi: 10.1038/s42003-021-01859-y. Commun Biol. 2021. PMID: 33712730 Free PMC article.
Genomic and Genetic Insights Into a Cosmopolitan Fungus, Paecilomyces variotii (Eurotiales).
Urquhart AS, Mondo SJ, Mäkelä MR, Hane JK, Wiebenga A, He G, Mihaltcheva S, Pangilinan J, Lipzen A, Barry K, de Vries RP, Grigoriev IV, Idnurm A. Urquhart AS, et al. Among authors: mihaltcheva s. Front Microbiol. 2018 Dec 13;9:3058. doi: 10.3389/fmicb.2018.03058. eCollection 2018. Front Microbiol. 2018. PMID: 30619145 Free PMC article.
The Aquilegia genome provides insight into adaptive radiation and reveals an extraordinarily polymorphic chromosome with a unique history.
Filiault DL, Ballerini ES, Mandáková T, Aköz G, Derieg NJ, Schmutz J, Jenkins J, Grimwood J, Shu S, Hayes RD, Hellsten U, Barry K, Yan J, Mihaltcheva S, Karafiátová M, Nizhynska V, Kramer EM, Lysak MA, Hodges SA, Nordborg M. Filiault DL, et al. Among authors: mihaltcheva s. Elife. 2018 Oct 16;7:e36426. doi: 10.7554/eLife.36426. Elife. 2018. PMID: 30325307 Free PMC article.
Genome expansion and lineage-specific genetic innovations in the forest pathogenic fungi Armillaria.
Sipos G, Prasanna AN, Walter MC, O'Connor E, Bálint B, Krizsán K, Kiss B, Hess J, Varga T, Slot J, Riley R, Bóka B, Rigling D, Barry K, Lee J, Mihaltcheva S, LaButti K, Lipzen A, Waldron R, Moloney NM, Sperisen C, Kredics L, Vágvölgyi C, Patrignani A, Fitzpatrick D, Nagy I, Doyle S, Anderson JB, Grigoriev IV, Güldener U, Münsterkötter M, Nagy LG. Sipos G, et al. Among authors: mihaltcheva s. Nat Ecol Evol. 2017 Dec;1(12):1931-1941. doi: 10.1038/s41559-017-0347-8. Epub 2017 Oct 30. Nat Ecol Evol. 2017. PMID: 29085064 Free article.
Genome sequencing of Rigidoporus microporus provides insights on genes important for wood decay, latex tolerance and interspecific fungal interactions.
Oghenekaro AO, Kovalchuk A, Raffaello T, Camarero S, Gressler M, Henrissat B, Lee J, Liu M, Martínez AT, Miettinen O, Mihaltcheva S, Pangilinan J, Ren F, Riley R, Ruiz-Dueñas FJ, Serrano A, Thon MR, Wen Z, Zeng Z, Barry K, Grigoriev IV, Martin F, Asiegbu FO. Oghenekaro AO, et al. Among authors: mihaltcheva s. Sci Rep. 2020 Mar 23;10(1):5250. doi: 10.1038/s41598-020-62150-4. Sci Rep. 2020. PMID: 32251355 Free PMC article.
Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum.
Peter M, Kohler A, Ohm RA, Kuo A, Krützmann J, Morin E, Arend M, Barry KW, Binder M, Choi C, Clum A, Copeland A, Grisel N, Haridas S, Kipfer T, LaButti K, Lindquist E, Lipzen A, Maire R, Meier B, Mihaltcheva S, Molinier V, Murat C, Pöggeler S, Quandt CA, Sperisen C, Tritt A, Tisserant E, Crous PW, Henrissat B, Nehls U, Egli S, Spatafora JW, Grigoriev IV, Martin FM. Peter M, et al. Among authors: mihaltcheva s. Nat Commun. 2016 Sep 7;7:12662. doi: 10.1038/ncomms12662. Nat Commun. 2016. PMID: 27601008 Free PMC article.
Author Correction: Genome expansion and lineage-specific genetic innovations in the forest pathogenic fungi Armillaria.
Sipos G, Prasanna AN, Walter MC, O'Connor E, Bálint B, Krizsán K, Kiss B, Hess J, Varga T, Slot J, Riley R, Bóka B, Rigling D, Barry K, Lee J, Mihaltcheva S, LaButti K, Lipzen A, Waldron R, Moloney NM, Sperisen C, Kredics L, Vágvölgyi C, Patrignani A, Fitzpatrick D, Nagy I, Doyle S, Anderson JB, Grigoriev IV, Güldener U, Münsterkötter M, Nagy LG. Sipos G, et al. Among authors: mihaltcheva s. Nat Ecol Evol. 2018 Mar;2(3):577. doi: 10.1038/s41559-018-0469-7. Nat Ecol Evol. 2018. PMID: 29426895
Characterization of four endophytic fungi as potential consolidated bioprocessing hosts for conversion of lignocellulose into advanced biofuels.
Wu W, Davis RW, Tran-Gyamfi MB, Kuo A, LaButti K, Mihaltcheva S, Hundley H, Chovatia M, Lindquist E, Barry K, Grigoriev IV, Henrissat B, Gladden JM. Wu W, et al. Among authors: mihaltcheva s. Appl Microbiol Biotechnol. 2017 Mar;101(6):2603-2618. doi: 10.1007/s00253-017-8091-1. Epub 2017 Jan 12. Appl Microbiol Biotechnol. 2017. PMID: 28078400
Author Correction: Genome sequencing of Rigidoporus microporus provides insights on genes important for wood decay, latex tolerance and interspecific fungal interactions.
Oghenekaro AO, Kovalchuk A, Raffaello T, Camarero S, Gressler M, Henrissat B, Lee J, Liu M, Martínez AT, Miettinen O, Mihaltcheva S, Pangilinan J, Ren F, Riley R, Ruiz-Dueñas FJ, Serrano A, Thon MR, Wen Z, Zeng Z, Barry K, Grigoriev IV, Martin F, Asiegbu FO. Oghenekaro AO, et al. Among authors: mihaltcheva s. Sci Rep. 2020 Oct 20;10(1):18199. doi: 10.1038/s41598-020-74783-6. Sci Rep. 2020. PMID: 33082478 Free PMC article.