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Page 1
Proteins' Knotty Problems.
Jarmolinska AI, Perlinska AP, Runkel R, Trefz B, Ginn HM, Virnau P, Sulkowska JI. Jarmolinska AI, et al. Among authors: perlinska ap. J Mol Biol. 2019 Jan 18;431(2):244-257. doi: 10.1016/j.jmb.2018.10.012. Epub 2018 Nov 1. J Mol Biol. 2019. PMID: 30391297 Free article.
AlphaFold predicts novel human proteins with knots.
Perlinska AP, Niemyska WH, Gren BA, Bukowicki M, Nowakowski S, Rubach P, Sulkowska JI. Perlinska AP, et al. Protein Sci. 2023 May;32(5):e4631. doi: 10.1002/pro.4631. Protein Sci. 2023. PMID: 36960558 Free PMC article.
Nucleolar Essential Protein 1 (Nep1): Elucidation of enzymatic catalysis mechanism by molecular dynamics simulation and quantum mechanics study.
Jedrzejewski M, Belza B, Lewandowska I, Sadlej M, Perlinska AP, Augustyniak R, Christian T, Hou YM, Kalek M, Sulkowska JI. Jedrzejewski M, et al. Among authors: perlinska ap. Comput Struct Biotechnol J. 2023 Aug 9;21:3999-4008. doi: 10.1016/j.csbj.2023.08.001. eCollection 2023. Comput Struct Biotechnol J. 2023. PMID: 37649713 Free PMC article.
Methyl transfer by substrate signaling from a knotted protein fold.
Christian T, Sakaguchi R, Perlinska AP, Lahoud G, Ito T, Taylor EA, Yokoyama S, Sulkowska JI, Hou YM. Christian T, et al. Among authors: perlinska ap. Nat Struct Mol Biol. 2016 Oct;23(10):941-948. doi: 10.1038/nsmb.3282. Epub 2016 Aug 29. Nat Struct Mol Biol. 2016. PMID: 27571175 Free PMC article.