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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1996 2
2000 1
2001 1
2002 2
2003 1
2004 1
2005 1
2006 1
2009 1
2012 2
2013 1
2014 5
2015 4
2016 5
2017 3
2019 4
2020 3
2021 2
2022 2
2023 1
2024 0

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37 results

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Page 1
Rhea, the reaction knowledgebase in 2022.
Bansal P, Morgat A, Axelsen KB, Muthukrishnan V, Coudert E, Aimo L, Hyka-Nouspikel N, Gasteiger E, Kerhornou A, Neto TB, Pozzato M, Blatter MC, Ignatchenko A, Redaschi N, Bridge A. Bansal P, et al. Among authors: redaschi n. Nucleic Acids Res. 2022 Jan 7;50(D1):D693-D700. doi: 10.1093/nar/gkab1016. Nucleic Acids Res. 2022. PMID: 34755880 Free PMC article.
Enzyme annotation in UniProtKB using Rhea.
Morgat A, Lombardot T, Coudert E, Axelsen K, Neto TB, Gehant S, Bansal P, Bolleman J, Gasteiger E, de Castro E, Baratin D, Pozzato M, Xenarios I, Poux S, Redaschi N, Bridge A; UniProt Consortium. Morgat A, et al. Among authors: redaschi n. Bioinformatics. 2020 Mar 1;36(6):1896-1901. doi: 10.1093/bioinformatics/btz817. Bioinformatics. 2020. PMID: 31688925 Free PMC article.
Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research.
Hufsky F, Lamkiewicz K, Almeida A, Aouacheria A, Arighi C, Bateman A, Baumbach J, Beerenwinkel N, Brandt C, Cacciabue M, Chuguransky S, Drechsel O, Finn RD, Fritz A, Fuchs S, Hattab G, Hauschild AC, Heider D, Hoffmann M, Hölzer M, Hoops S, Kaderali L, Kalvari I, von Kleist M, Kmiecinski R, Kühnert D, Lasso G, Libin P, List M, Löchel HF, Martin MJ, Martin R, Matschinske J, McHardy AC, Mendes P, Mistry J, Navratil V, Nawrocki EP, O'Toole ÁN, Ontiveros-Palacios N, Petrov AI, Rangel-Pineros G, Redaschi N, Reimering S, Reinert K, Reyes A, Richardson L, Robertson DL, Sadegh S, Singer JB, Theys K, Upton C, Welzel M, Williams L, Marz M. Hufsky F, et al. Among authors: redaschi n. Brief Bioinform. 2021 Mar 22;22(2):642-663. doi: 10.1093/bib/bbaa232. Brief Bioinform. 2021. PMID: 33147627 Free PMC article. Review.
FAIR adoption, assessment and challenges at UniProt.
Garcia L, Bolleman J, Gehant S, Redaschi N, Martin M; UniProt Consortium. Garcia L, et al. Among authors: redaschi n. Sci Data. 2019 Sep 20;6(1):175. doi: 10.1038/s41597-019-0180-9. Sci Data. 2019. PMID: 31541106 Free PMC article.
Updates in Rhea: SPARQLing biochemical reaction data.
Lombardot T, Morgat A, Axelsen KB, Aimo L, Hyka-Nouspikel N, Niknejad A, Ignatchenko A, Xenarios I, Coudert E, Redaschi N, Bridge A. Lombardot T, et al. Among authors: redaschi n. Nucleic Acids Res. 2019 Jan 8;47(D1):D596-D600. doi: 10.1093/nar/gky876. Nucleic Acids Res. 2019. PMID: 30272209 Free PMC article.
Annotation of biologically relevant ligands in UniProtKB using ChEBI.
Coudert E, Gehant S, de Castro E, Pozzato M, Baratin D, Neto T, Sigrist CJA, Redaschi N, Bridge A; UniProt Consortium. Coudert E, et al. Among authors: redaschi n. Bioinformatics. 2023 Jan 1;39(1):btac793. doi: 10.1093/bioinformatics/btac793. Bioinformatics. 2023. PMID: 36484697 Free PMC article.
The UniProtKB guide to the human proteome.
Breuza L, Poux S, Estreicher A, Famiglietti ML, Magrane M, Tognolli M, Bridge A, Baratin D, Redaschi N; UniProt Consortium. Breuza L, et al. Among authors: redaschi n. Database (Oxford). 2016 Feb 20;2016:bav120. doi: 10.1093/database/bav120. Print 2016. Database (Oxford). 2016. PMID: 26896845 Free PMC article.
ExPASy: SIB bioinformatics resource portal.
Artimo P, Jonnalagedda M, Arnold K, Baratin D, Csardi G, de Castro E, Duvaud S, Flegel V, Fortier A, Gasteiger E, Grosdidier A, Hernandez C, Ioannidis V, Kuznetsov D, Liechti R, Moretti S, Mostaguir K, Redaschi N, Rossier G, Xenarios I, Stockinger H. Artimo P, et al. Among authors: redaschi n. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W597-603. doi: 10.1093/nar/gks400. Epub 2012 May 31. Nucleic Acids Res. 2012. PMID: 22661580 Free PMC article.
InterPro in 2017-beyond protein family and domain annotations.
Finn RD, Attwood TK, Babbitt PC, Bateman A, Bork P, Bridge AJ, Chang HY, Dosztányi Z, El-Gebali S, Fraser M, Gough J, Haft D, Holliday GL, Huang H, Huang X, Letunic I, Lopez R, Lu S, Marchler-Bauer A, Mi H, Mistry J, Natale DA, Necci M, Nuka G, Orengo CA, Park Y, Pesseat S, Piovesan D, Potter SC, Rawlings ND, Redaschi N, Richardson L, Rivoire C, Sangrador-Vegas A, Sigrist C, Sillitoe I, Smithers B, Squizzato S, Sutton G, Thanki N, Thomas PD, Tosatto SC, Wu CH, Xenarios I, Yeh LS, Young SY, Mitchell AL. Finn RD, et al. Among authors: redaschi n. Nucleic Acids Res. 2017 Jan 4;45(D1):D190-D199. doi: 10.1093/nar/gkw1107. Epub 2016 Nov 29. Nucleic Acids Res. 2017. PMID: 27899635 Free PMC article.
37 results